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GrainGenes Marker Report: POPA3_0746

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Locus
POPA3_0746
Type
SNP
Chromosome
2H
Map
Barley-Core-2014_2H79.75
Hordeum-OPAConsensus-2011-2H89.68
[ Show Nearby Loci ]
QTL with Locus Marker
MQTL_Du2024.yield-2H.9
Map Data
Barley, OPA 2009, Consensus
Barley, OPA 2011, Consensus
Barley, USDA Core, 2014 Consensus
Probe
HAR35_19909
Reference
ReferenceClose TJ et al. (2009) Development and implementation of high-throughput SNP genotyping in barley. BMC Genomics 10:582.
Remark
[ Hide all but 1 of 7 ]
Marker name in barley Pilot OPA1 = 3_0746
Most representative HarvEST:Barley Assembly #32 Unigene = 8300
Most representative HarvEST:Barley Assembly #35 Unigene = 19909
HarvEST Unigene 35 Probe Set =
Unigene 35 Rice Locus = LOC_Os04g43650
Description for best rice BLAST hit to Unigene 35 member = L-allo-threonine aldolase, putative, expressed; E value = 4E-84
BLAST hit in the rice genome = L-allo-threonine aldolase, putative, expressed



Probe for Locus
HAR35_19909
Locus
POPA3_0746