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GrainGenes Marker Report: POPA3_0845

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Locus	POPA3_0845
Type	SNP
Synonym	Other name 12_30845 BOPA2_12_30845 Synonym 12_30845
Map Data	Barley, OPA 2009, Consensus
Species	Hordeum vulgare
Probe	HAR35_30843 i_12_30845
Reference	Comadran J et al. (2012) Natural variation in a homolog of Antirrhinum CENTRORADIALIS contributed to spring growth habit and environmental adaptation in cultivated barley Nature Genetics 44:1388-1392. Close TJ et al. (2009) Development and implementation of high-throughput SNP genotyping in barley. BMC Genomics 10:582.
Remark	[ Hide all but 1 of 9 ] Marker name in barley Pilot OPA1 = 3_0845 Marker name in barley OPA1 = 12_30845 Original SNP name = OSU_HVCBF10B_636 Most representative HarvEST:Barley Assembly #32 Unigene = 27275 Most representative HarvEST:Barley Assembly #35 Unigene = 30843 HarvEST Unigene 35 Probe Set = Unigene 35 Rice Locus = LOC_Os09g35020 Description for best rice BLAST hit to Unigene 35 member = dehydration-responsive element-binding protein 1D, putative, expressed; E value = 6E-46 BLAST hit in the rice genome = dehydration-responsive element-binding protein 1D, putative, expressed
Probe for Locus	HAR35_30843
Locus	POPA3_0845