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GrainGenes Marker Report: POPA3_0886

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Locus
POPA3_0886
Type
SNP
Synonym
Other name12_30886
BOPA2_12_30886
Synonym12_30886
Chromosome
4H
Chromosome Arm
4HL
Map
Hordeum-OPA-2009-4H119.09
Hordeum-OPA123-2008-4H119.09
Hordeum-OPAConsensus-2011-4H143.35
Hordeum-OWB-OPA2008-4H115.037
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Map Data
Barley, OPA 2009, Consensus
Barley, OPA 2011, Consensus
Barley, OPA123-2008, Consensus
Barley, OWB, OPA2008
Species
Hordeum vulgare
Probe
HAR35_0
i_12_30886
Reference
ReferenceComadran J et al. (2012) Natural variation in a homolog of Antirrhinum CENTRORADIALIS contributed to spring growth habit and environmental adaptation in cultivated barley Nature Genetics 44:1388-1392.
ReferenceSzucs P et al. (2009) An Integrated Resource for Barley Linkage Map and Malting Quality QTL Alignment The Plant Genome 2:134-140.
ReferenceClose TJ et al. (2009) Development and implementation of high-throughput SNP genotyping in barley. BMC Genomics 10:582.
Data Source
Close, Timothy J.
Remark
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Marker name in barley Pilot OPA1 = 3_0886
Marker name in barley OPA1 = 12_30886
Original SNP name = OSU_VRN_H2_ZCCT_Ha_830
Most representative HarvEST:Barley Assembly #32 Unigene = 0
Most representative HarvEST:Barley Assembly #35 Unigene = 0
HarvEST Unigene 35 Probe Set =
Unigene 35 Rice Locus =
Description for best rice BLAST hit to Unigene 35 member = ; E value =
Marker name in barley Pilot OPA3 = 3_0886
Marker name in barley OPA2 = 12_30886
Original SNP name = U32_990_399



Probe for Locus
HAR35_0
Locus
POPA3_0817
[ Show all 32 ]