GrainGenes Marker Report: POPA3_0911
Locus
POPA3_0911
Type
SNP
Map Data
Barley, OPA 2009, Consensus
Probe
HAR35_16090
Reference
Close TJ et al. (2009) Development and implementation of high-throughput SNP genotyping in barley. BMC Genomics 10:582.
Remark
[ Hide all but 1 of 7 ] Marker name in barley Pilot OPA1 = 3_0911 Most representative HarvEST:Barley Assembly #32 Unigene = 3513 Most representative HarvEST:Barley Assembly #35 Unigene = 16090 HarvEST Unigene 35 Probe Set = Contig4887_s_at Unigene 35 Rice Locus = LOC_Os09g21370 Description for best rice BLAST hit to Unigene 35 member = cysteine proteinase EP-B 1 precursor, putative, expressed; E value = 8E-34 BLAST hit in the rice genome = cysteine proteinase EP-B 1 precursor, putative, expressed
Probe for Locus
HAR35_16090
Locus
POPA3_0495 POPA3_0911 POPA3_0912
Synonym
Synonym BCD249 CDO309
General Remarks
Probe name is structured 'HAR35_xxxxx' where HAR35 denotes the 35th assembly in the HarvEST project and xxxx is the Unigene number
Type
cDNA
Source Species
Hordeum vulgare
GrainGenes Marker Report: POPA3_0911
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