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GrainGenes Marker Report: POPA3_0941

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Locus	POPA3_0941
Type	SNP
Synonym	Other name 12_30941 BOPA2_12_30941 Synonym 12_30941
Map Data	Barley, OPA 2009, Consensus
Species	Hordeum vulgare
Probe	HAR35_14630 i_12_30941
Reference	Comadran J et al. (2012) Natural variation in a homolog of Antirrhinum CENTRORADIALIS contributed to spring growth habit and environmental adaptation in cultivated barley Nature Genetics 44:1388-1392. Close TJ et al. (2009) Development and implementation of high-throughput SNP genotyping in barley. BMC Genomics 10:582.
Remark	[ Hide all but 1 of 9 ] Marker name in barley Pilot OPA1 = 3_0941 Marker name in barley OPA1 = 12_30941 Original SNP name = SCRI_bbc01856_02_1 Most representative HarvEST:Barley Assembly #32 Unigene = 1856 Most representative HarvEST:Barley Assembly #35 Unigene = 14630 HarvEST Unigene 35 Probe Set = Contig2834_at Unigene 35 Rice Locus = LOC_Os05g31140 Description for best rice BLAST hit to Unigene 35 member = lichenase-2 precursor, putative, expressed; E value = 1E-159 BLAST hit in the rice genome = lichenase-2 precursor, putative, expressed
Probe for Locus	HAR35_14630
Locus	POPA3_0941