GrainGenes Marker Report: POPA3_0954
Locus
POPA3_0954
Type
SNP
Map Data
Barley, OPA 2009, Consensus
Probe
HAR35_2554
Reference
Close TJ et al. (2009) Development and implementation of high-throughput SNP genotyping in barley. BMC Genomics 10:582.
Remark
[ Hide all but 1 of 7 ] Marker name in barley Pilot OPA1 = 3_0954 Most representative HarvEST:Barley Assembly #32 Unigene = 7107 Most representative HarvEST:Barley Assembly #35 Unigene = 2554 HarvEST Unigene 35 Probe Set = Contig9276_at; Contig9277_s_at; HVSMEb0013I22f_s_at Unigene 35 Rice Locus = LOC_Os05g02130 Description for best rice BLAST hit to Unigene 35 member = ankyrin repeat domain-containing protein 28, putative, expressed; E value = 0 BLAST hit in the rice genome = ankyrin repeat domain-containing protein 28, putative, expressed
Probe for Locus
HAR35_2554
Locus
POPA3_0118 POPA3_0955 POPA3_0954
General Remarks
Probe name is structured 'HAR35_xxxxx' where HAR35 denotes the 35th assembly in the HarvEST project and xxxx is the Unigene number
Type
cDNA
Source Species
Hordeum vulgare
GrainGenes Marker Report: POPA3_0954
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