Query (optional)   in Class  

GrainGenes Marker Report: POPA3_0967

[Submit comment/correction]

Locus
POPA3_0967
Type
SNP
Synonym
Other name12_30967
BOPA2_12_30967
Synonym12_30967
Map Data
Barley, OPA 2009, Consensus
Species
Hordeum vulgare
Probe
HAR35_7337
i_12_30967
Reference
ReferenceComadran J et al. (2012) Natural variation in a homolog of Antirrhinum CENTRORADIALIS contributed to spring growth habit and environmental adaptation in cultivated barley Nature Genetics 44:1388-1392.
ReferenceClose TJ et al. (2009) Development and implementation of high-throughput SNP genotyping in barley. BMC Genomics 10:582.
Remark
[ Hide all but 1 of 8 ]
Marker name in barley Pilot OPA1 = 3_0967
Marker name in barley OPA1 = 12_30967
Original SNP name = SCRI_bbc13095_01_469
Most representative HarvEST:Barley Assembly #32 Unigene = 13095
Most representative HarvEST:Barley Assembly #35 Unigene = 7337
HarvEST Unigene 35 Probe Set = Contig15365_s_at
Unigene 35 Rice Locus =
Description for best rice BLAST hit to Unigene 35 member = ; E value =



Probe for Locus
HAR35_7337
Locus
POPA2_0138
POPA3_0967
General Remarks
Probe name is structured 'HAR35_xxxxx' where HAR35 denotes the 35th assembly in the HarvEST project and xxxx is the Unigene number
Type
cDNA
Source Species
Hordeum vulgare