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GrainGenes Marker Report: POPA3_0999

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Locus
POPA3_0999
Type
SNP
Synonym
Other name12_30999
BOPA2_12_30999
Synonym12_30999
Chromosome
7H
Map
Barley, 2012 9KSNP 7H77.3
[ Show Nearby Loci ]
Map Data
Barley, 2012 9KSNP
Barley, OPA 2009, Consensus
Species
Hordeum vulgare
Probe
HAR35_2651
i_12_30999
Reference
ReferenceComadran J et al. (2012) Natural variation in a homolog of Antirrhinum CENTRORADIALIS contributed to spring growth habit and environmental adaptation in cultivated barley Nature Genetics 44:1388-1392.
ReferenceClose TJ et al. (2009) Development and implementation of high-throughput SNP genotyping in barley. BMC Genomics 10:582.
Remark
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Marker name in barley Pilot OPA1 = 3_0999
Marker name in barley OPA1 = 12_30999
Original SNP name = SCRI_olad_138_01
Most representative HarvEST:Barley Assembly #32 Unigene = 5373
Most representative HarvEST:Barley Assembly #35 Unigene = 2651
HarvEST Unigene 35 Probe Set = Contig7248_at; Contig7251_at
Unigene 35 Rice Locus =
Description for best rice BLAST hit to Unigene 35 member = ; E value =



Probe for Locus
HAR35_2651
Locus
POPA3_0999