Query (optional)   in Class  All Allele Author Colleague Collection Assembly Gene Gene Class Gene Product Germplasm Image Journal Keyword Library Locus Map Map Data Marker Pathology Polymorphism Probe Protein QTL Rearrangement Reference Sequence Species Trait Trait Study Two Point Data  

---

GrainGenes Marker Report: POPA3_1054

[Submit comment/correction]

Locus	POPA3_1054
Type	SNP
Synonym	Synonym 12_31054
Map Data	Barley, OPA 2009, Consensus
Probe	HAR35_155
Reference	Close TJ et al. (2009) Development and implementation of high-throughput SNP genotyping in barley. BMC Genomics 10:582.
Remark	[ Hide all but 1 of 9 ] Marker name in barley Pilot OPA1 = 3_1054 Marker name in barley OPA1 = 12_31054 Original SNP name = UCI_G3pdh_127 Most representative HarvEST:Barley Assembly #32 Unigene = 238 Most representative HarvEST:Barley Assembly #35 Unigene = 155 HarvEST Unigene 35 Probe Set = Contig149_at Unigene 35 Rice Locus = LOC_Os08g03290 Description for best rice BLAST hit to Unigene 35 member = glyceraldehyde-3-phosphate dehydrogenase, cytosolic, putative, expressed; E value = 0.000000000000000006 BLAST hit in the rice genome = glyceraldehyde-3-phosphate dehydrogenase, cytosolic, putative, expressed
Probe for Locus	HAR35_155
Locus	POPA3_1054 POPA3_1055 POPA3_1056