GrainGenes Marker Report: POPA3_1074
Locus
POPA3_1074
Type
SNP
Synonym
Synonym 12_31074
Map Data
Barley, OPA 2009, Consensus
Probe
HAR35_13040
Reference
Close TJ et al. (2009) Development and implementation of high-throughput SNP genotyping in barley. BMC Genomics 10:582.
Remark
[ Hide all but 1 of 9 ] Marker name in barley Pilot OPA1 = 3_1074 Marker name in barley OPA1 = 12_31074 Original SNP name = UM_RPG1_533 Most representative HarvEST:Barley Assembly #32 Unigene = 23371 Most representative HarvEST:Barley Assembly #35 Unigene = 13040 HarvEST Unigene 35 Probe Set = AF509747.1_at Unigene 35 Rice Locus = LOC_Os11g39450 Description for best rice BLAST hit to Unigene 35 member = stem rust resistance protein, putative, expressed; E value = 1E-89 BLAST hit in the rice genome = stem rust resistance protein, putative, expressed
Probe for Locus
HAR35_13040
Locus
POPA3_1072
[ Show all 6 ]
General Remarks
Probe name is structured 'HAR35_xxxxx' where HAR35 denotes the 35th assembly in the HarvEST project and xxxx is the Unigene number
Type
cDNA
Source Species
Hordeum vulgare
GrainGenes Marker Report: POPA3_1074
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