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GrainGenes Marker Report: POPA3_1099

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Locus	POPA3_1099
Type	SNP
Synonym	Other name 12_31099 BOPA2_12_31099 Synonym 12_31099
Map Data	Barley, OPA 2009, Consensus
Species	Hordeum vulgare
Probe	HAR35_14649 i_12_31099
Reference	Comadran J et al. (2012) Natural variation in a homolog of Antirrhinum CENTRORADIALIS contributed to spring growth habit and environmental adaptation in cultivated barley Nature Genetics 44:1388-1392. Close TJ et al. (2009) Development and implementation of high-throughput SNP genotyping in barley. BMC Genomics 10:582.
Remark	[ Hide all but 1 of 9 ] Marker name in barley Pilot OPA1 = 3_1099 Marker name in barley OPA1 = 12_31099 Original SNP name = U35_14649_107 Most representative HarvEST:Barley Assembly #32 Unigene = 1534 Most representative HarvEST:Barley Assembly #35 Unigene = 14649 HarvEST Unigene 35 Probe Set = HD04G07u_s_at; HD07M22r_s_at Unigene 35 Rice Locus = LOC_Os01g04040 Description for best rice BLAST hit to Unigene 35 member = Bowman-Birk type wound-induced proteinase inhibitor WIP1 precursor, putative; E value = 0.000000000008 BLAST hit in the rice genome = Bowman-Birk type wound-induced proteinase inhibitor WIP1 precursor, putative
Probe for Locus	HAR35_14649
Locus	POPA3_1099