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GrainGenes Marker Report: POPA3_1110

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Locus	POPA3_1110
Type	SNP
Synonym	Other name 12_31110 BOPA2_12_31110 Synonym 12_31110
Map Data	Barley, OPA 2009, Consensus
Species	Hordeum vulgare
Probe	HAR35_15138 i_12_31110
Reference	Comadran J et al. (2012) Natural variation in a homolog of Antirrhinum CENTRORADIALIS contributed to spring growth habit and environmental adaptation in cultivated barley Nature Genetics 44:1388-1392. Close TJ et al. (2009) Development and implementation of high-throughput SNP genotyping in barley. BMC Genomics 10:582.
Remark	[ Hide all but 1 of 9 ] Marker name in barley Pilot OPA1 = 3_1110 Marker name in barley OPA1 = 12_31110 Original SNP name = U35_15138_653 Most representative HarvEST:Barley Assembly #32 Unigene = 1875 Most representative HarvEST:Barley Assembly #35 Unigene = 15138 HarvEST Unigene 35 Probe Set = Contig2804_x_at; rbah41a21_s_at Unigene 35 Rice Locus = LOC_Os03g12450 Description for best rice BLAST hit to Unigene 35 member = nucleoporin, putative, expressed; E value = 0.0000000000000001 BLAST hit in the rice genome = nucleoporin, putative, expressed
Probe for Locus	HAR35_15138
Locus	POPA3_1110