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GrainGenes Marker Report: POPA3_1295

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Locus	POPA3_1295
Type	SNP
Synonym	Other name 12_31295 BOPA2_12_31295 Synonym 12_31295
Map Data	Barley, OPA 2009, Consensus
Species	Hordeum vulgare
Probe	HAR35_20425 i_12_31295
Reference	Comadran J et al. (2012) Natural variation in a homolog of Antirrhinum CENTRORADIALIS contributed to spring growth habit and environmental adaptation in cultivated barley Nature Genetics 44:1388-1392. Close TJ et al. (2009) Development and implementation of high-throughput SNP genotyping in barley. BMC Genomics 10:582.
Remark	[ Hide all but 1 of 9 ] Marker name in barley Pilot OPA1 = 3_1295 Marker name in barley OPA1 = 12_31295 Original SNP name = U35_20425_450 Most representative HarvEST:Barley Assembly #32 Unigene = 17845 Most representative HarvEST:Barley Assembly #35 Unigene = 20425 HarvEST Unigene 35 Probe Set = Contig20792_at Unigene 35 Rice Locus = LOC_Os03g53630 Description for best rice BLAST hit to Unigene 35 member = DNA binding protein, putative, expressed; E value = 1E-49 BLAST hit in the rice genome = DNA binding protein, putative, expressed
Probe for Locus	HAR35_20425
Locus	POPA3_1295