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GrainGenes Marker Report: POPA3_1328

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Locus
POPA3_1328
Type
SNP
Map Data
Barley, OPA 2009, Consensus
Probe
HAR35_2236
Reference
ReferenceClose TJ et al. (2009) Development and implementation of high-throughput SNP genotyping in barley. BMC Genomics 10:582.
Remark
[ Hide all but 1 of 7 ]
Marker name in barley Pilot OPA1 = 3_1328
Most representative HarvEST:Barley Assembly #32 Unigene = 4719
Most representative HarvEST:Barley Assembly #35 Unigene = 2236
HarvEST Unigene 35 Probe Set = Contig6587_at; Contig6587_s_at
Unigene 35 Rice Locus = LOC_Os11g05860
Description for best rice BLAST hit to Unigene 35 member = VAMP protein SEC22, putative, expressed; E value = 1E-103
BLAST hit in the rice genome = VAMP protein SEC22, putative, expressed



Probe for Locus
HAR35_2236
Locus
POPA3_1328