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GrainGenes Marker Report: POPA3_1363

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Locus	POPA3_1363
Type	SNP
Synonym	Synonym 12_31363
Chromosome	7H
Chromosome Arm	7HL
Map	Hordeum-OPA-2009-7H 116.95 Hordeum-OPA123-2008-7H 116.95 Hordeum-OPAConsensus-2011-7H 116.94
	[ Show Nearby Loci ]
Map Data	Barley, OPA 2009, Consensus Barley, OPA 2011, Consensus Barley, OPA123-2008, Consensus
Probe	HAR35_2925
Reference	Close TJ et al. (2009) Development and implementation of high-throughput SNP genotyping in barley. BMC Genomics 10:582.
Data Source	Close, Timothy J.
Remark	[ Hide all but 1 of 12 ] Marker name in barley Pilot OPA1 = 3_1363 Marker name in barley OPA1 = 12_31363 Original SNP name = U35_2925_110 Most representative HarvEST:Barley Assembly #32 Unigene = 18703 Most representative HarvEST:Barley Assembly #35 Unigene = 2925 HarvEST Unigene 35 Probe Set = HM04L20u_at Unigene 35 Rice Locus = LOC_Os06g46680 Description for best rice BLAST hit to Unigene 35 member = cytochrome P450 77A3, putative, expressed; E value = 0 Marker name in barley Pilot OPA3 = 3_1363 Marker name in barley OPA2 = 12_31363 Description for best rice BLAST hit to Unigene 35 member = protein cytochrome P450 77A3, putative, expressed; E value = 0 BLAST hit in the rice genome = cytochrome P450 77A3, putative, expressed
Probe for Locus	HAR35_2925
Locus	POPA3_1363
General Remarks	Probe name is structured 'HAR35_xxxxx' where HAR35 denotes the 35th assembly in the HarvEST project and xxxx is the Unigene number
Type	cDNA
Source Species	Hordeum vulgare