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GrainGenes Marker Report: POPA3_1369

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Locus
POPA3_1369
Type
SNP
Map Data
Barley, OPA 2009, Consensus
Probe
HAR35_3116
Reference
ReferenceClose TJ et al. (2009) Development and implementation of high-throughput SNP genotyping in barley. BMC Genomics 10:582.
Remark
[ Hide all but 1 of 7 ]
Marker name in barley Pilot OPA1 = 3_1369
Most representative HarvEST:Barley Assembly #32 Unigene = 5624
Most representative HarvEST:Barley Assembly #35 Unigene = 3116
HarvEST Unigene 35 Probe Set = Contig7569_at; HVSMEl0006J08r2_s_at
Unigene 35 Rice Locus = LOC_Os02g08300
Description for best rice BLAST hit to Unigene 35 member = DNA repair protein RAD23-1, putative, expressed; E value = 1E-165
BLAST hit in the rice genome = DNA repair protein RAD23-1, putative, expressed



Probe for Locus
HAR35_3116
Locus
POPA3_1369