GrainGenes Marker Report: POPA3_1396
Locus
POPA3_1396
Type
SNP
Synonym
Synonym 12_31396
Chromosome
7H
Chromosome Arm
7HS
Map
Hordeum-OPA-2009-7H 3.34 Hordeum-OPA123-2008-7H 3.34
[ Show Nearby Loci ]
Map Data
Barley, OPA 2009, Consensus Barley, OPA123-2008, Consensus
Probe
HAR35_3681
Reference
Close TJ et al. (2009) Development and implementation of high-throughput SNP genotyping in barley. BMC Genomics 10:582.
Data Source
Close, Timothy J.
Remark
[ Hide all but 1 of 11 ] Marker name in barley Pilot OPA1 = 3_1396 Marker name in barley OPA1 = 12_31396 Original SNP name = U35_3681_680 Most representative HarvEST:Barley Assembly #32 Unigene = 6113 Most representative HarvEST:Barley Assembly #35 Unigene = 3681 HarvEST Unigene 35 Probe Set = Contig8303_at; Contig8304_s_at Unigene 35 Rice Locus = Description for best rice BLAST hit to Unigene 35 member = ; E value = Marker name in barley Pilot OPA3 = 3_1396 Marker name in barley OPA2 = 12_31396 HarvEST Unigene 35 Probe Set = Contig8303_at, Contig8304_s_at
Probe for Locus
HAR35_3681
Locus
POPA3_1396
General Remarks
Probe name is structured 'HAR35_xxxxx' where HAR35 denotes the 35th assembly in the HarvEST project and xxxx is the Unigene number
Type
cDNA
Source Species
Hordeum vulgare
GrainGenes Marker Report: POPA3_1396
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