Query (optional)   in Class  

GrainGenes Marker Report: POPA3_1397

Locus
POPA3_1397
Type
SNP
Map Data
Barley, OPA 2009, Consensus
Probe
HAR35_3699
Reference
ReferenceClose TJ et al. (2009) Development and implementation of high-throughput SNP genotyping in barley. BMC Genomics 10:582.
Remark
[ Hide all but 1 of 7 ]
Marker name in barley Pilot OPA1 = 3_1397
Most representative HarvEST:Barley Assembly #32 Unigene = 7589
Most representative HarvEST:Barley Assembly #35 Unigene = 3699
HarvEST Unigene 35 Probe Set = Contig9982_at
Unigene 35 Rice Locus = LOC_Os03g02320
Description for best rice BLAST hit to Unigene 35 member = ATP binding protein, putative, expressed; E value = 2E-83
BLAST hit in the rice genome = ATP binding protein, putative, expressed



Probe for Locus
HAR35_3699
Locus
POPA3_1397
Synonym
SynonymABG601
General Remarks
Probe name is structured 'HAR35_xxxxx' where HAR35 denotes the 35th assembly in the HarvEST project and xxxx is the Unigene number
Type
cDNA
Source Species
Hordeum vulgare