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GrainGenes Marker Report: POPA3_1482

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Locus	POPA3_1482
Type	SNP
Chromosome	5H
Chromosome Arm	5HS
Map	Hordeum-OPA-2009-5H 46.23 Hordeum-OPA123-2008-5H 46.23
	[ Show Nearby Loci ]
Map Data	Barley, OPA 2009, Consensus Barley, OPA123-2008, Consensus
Probe	HAR35_5850
Reference	Close TJ et al. (2009) Development and implementation of high-throughput SNP genotyping in barley. BMC Genomics 10:582.
Data Source	Close, Timothy J.
Remark	[ Hide all but 1 of 9 ] Marker name in barley Pilot OPA1 = 3_1482 Most representative HarvEST:Barley Assembly #32 Unigene = 22422 Most representative HarvEST:Barley Assembly #35 Unigene = 5850 HarvEST Unigene 35 Probe Set = Contig24190_at Unigene 35 Rice Locus = LOC_Os12g41490 Description for best rice BLAST hit to Unigene 35 member = receptor-like protein kinase homolog RK20-1, putative, expressed; E value = 2E-76 Marker name in barley Pilot OPA3 = 3_1482 Description for best rice BLAST hit to Unigene 35 member = protein receptor-like protein kinase homolog RK20-1, putative, expressed; E value = 2E-76 BLAST hit in the rice genome = receptor-like protein kinase homolog RK20-1, putative, expressed
Probe for Locus	HAR35_5850
Locus	POPA3_1482
General Remarks	Probe name is structured 'HAR35_xxxxx' where HAR35 denotes the 35th assembly in the HarvEST project and xxxx is the Unigene number
Type	cDNA
Source Species	Hordeum vulgare