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GrainGenes Marker Report: Pcr2

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Locus	Pcr2
Type	RFLP
Synonym	Synonym pHvDF1
Chromosome	1H
Chromosome Arm	1HL
Map	[ Hide all but 1 of 15 ] Barley-Consensus-1H 13.3 Barley-Consensus2-1H 74.1 Barley-ConsensusFHB-1H 60.2 Hordeum-Consensus2005-SNP-1H 69.185 Hordeum-Consensus2007-SSR-1H 61.52 Hordeum-Genes-1H 15 Hordeum-NABGMP1-1H 63.1 Hordeum-OPA-2009-1H 74.4 Hordeum-PilotOPA1-1H 58.75 Hordeum-QTLConsensus-Abiotic-1H 69.19 Hordeum-QTLConsensus-Agronomic-1H 69.19 Hordeum-StMo-SNP-1H 75.81 Hordeum-SxM-FeedQTL-1H 63.1 Hv-Consensus2006-Marcel-1H 61.52 Hv-Integrated2009-1H 61.6
	[ Show Nearby Loci ]
Map Data	Barley consensus [ Show all 15 ]
Species	Hordeum vulgare
Probe	pHvDF1
Reference	Close TJ et al. (2009) Development and implementation of high-throughput SNP genotyping in barley. BMC Genomics 10:582. Varshney RK et al. (2007) A high density barley microsatellite consensus map with 775 SSR loci. Theoretical and Applied Genetics 114:1091. Rostoks N et al. (2005) Genome-wide SNP discovery and linkage analysis in barley based on genes responsive to abiotic stress. Molecular Genetics and Genomics 274:515-527.
Data Source	Blake, Tom 05.04.19 Close, Timothy J.
Remark	Bin on the 'Barley, Integrated, Marcel 2009' Map Set : 'chromosome_kleinhofs & graner BIN nb.subBIN nb' Mapping population(s) used for locus placement on the 'Barley, Integrated, Marcel 2009' Map Set = Steptoe x Morex Loci in 'Barley, Consensus 2006, Marcel' mapped in population(s) : Steptoe x Morex Locus in 'Barley, Consensus 2007, SSR' was a BIN marker in 'Barley, Consensus 2006, Marcel'
Probe for Locus	pHvDF1
Locus	Pcr2 Pcr1 Pcr2-1H
Reference	Schulz R et al. (1989) Nucleotide sequence of a complementary DNA coding for the NADPH-protochlorophyllide oxidoreductase PCR of barley Hordeum-vulgare L. and its expression in Escherichia-coli Molecular and General Genetics 217:355-361. Steinmuller K et al. (1986) The light-induced greening of barley Molecular Form and Function of the Plant Genome 83:277-290. Apel K et al. (1983) The light-dependent control of chloroplast development in barley (Hordeum vulgare L.) Journal of Cellular Biochemistry 23:181-189.
Type	cDNA
Linkage Group	2
Source Gene Class	NADPH protochlorophyllide oxidoreductase
Source Gene	Pcr1 (Hordeum)
Source Species	Hordeum vulgare
Insert Size	0.524 0.6