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GrainGenes Marker Report: Pcr2

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Locus	Pcr2
Type	RFLP
Synonym	Synonym pHvDF1
Chromosome	1H
Chromosome Arm	1HL
Map	Barley-Consensus-1H 13.3 [ Show all 15 ]
	[ Show Nearby Loci ]
Map Data	[ Hide all but 1 of 15 ] Barley consensus Barley consensus 2 Barley genes Barley, Abiotic QTL Consensus Barley, Agronomic QTL Consensus Barley, Consensus 2005, SNP Barley, Consensus 2006, Marcel Barley, Consensus 2007, SSR Barley, Consensus 2023, FHB Barley, Integrated, Marcel 2009 Barley, OPA 2009, Consensus Barley, Pilot OPA1, Consensus Barley, Steptoe x Morex, SNP Barley, SxM Barley, SxM, Feed QTLs
Species	Hordeum vulgare
Probe	pHvDF1
Reference	Close TJ et al. (2009) Development and implementation of high-throughput SNP genotyping in barley. BMC Genomics 10:582. Varshney RK et al. (2007) A high density barley microsatellite consensus map with 775 SSR loci. Theoretical and Applied Genetics 114:1091. Rostoks N et al. (2005) Genome-wide SNP discovery and linkage analysis in barley based on genes responsive to abiotic stress. Molecular Genetics and Genomics 274:515-527.
Data Source	Blake, Tom 05.04.19 Close, Timothy J.
Remark	Bin on the 'Barley, Integrated, Marcel 2009' Map Set : 'chromosome_kleinhofs & graner BIN nb.subBIN nb' Mapping population(s) used for locus placement on the 'Barley, Integrated, Marcel 2009' Map Set = Steptoe x Morex Loci in 'Barley, Consensus 2006, Marcel' mapped in population(s) : Steptoe x Morex Locus in 'Barley, Consensus 2007, SSR' was a BIN marker in 'Barley, Consensus 2006, Marcel'
Probe for Locus	pHvDF1
Locus	Pcr2 Pcr1 Pcr2-1H
Reference	Schulz R et al. (1989) Nucleotide sequence of a complementary DNA coding for the NADPH-protochlorophyllide oxidoreductase PCR of barley Hordeum-vulgare L. and its expression in Escherichia-coli Molecular and General Genetics 217:355-361. Steinmuller K et al. (1986) The light-induced greening of barley Molecular Form and Function of the Plant Genome 83:277-290. Apel K et al. (1983) The light-dependent control of chloroplast development in barley (Hordeum vulgare L.) Journal of Cellular Biochemistry 23:181-189.
Type	cDNA
Linkage Group	2
Source Gene Class	NADPH protochlorophyllide oxidoreductase
Source Gene	Pcr1 (Hordeum)
Source Species	Hordeum vulgare
Insert Size	0.524 0.6