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GrainGenes Marker Report: Pgk2 (Hordeum)

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Gene	Pgk2 (Hordeum)
Gene Class	Cytosolic phosphoglycerate kinase
Candidate Locus	Pgk2A Pgk2B
Reference	Chao S et al. (1989) Chromosomal location and copy number in wheat and some of its close relatives of genes for enzymes involved in photosynthesis. Molecular and General Genetics 218:423-430.
Chromosome	6H
Info Source	von Wettstein-Knowles P (1993) Barley (Hordeum vulgare) 2N = 14. Genetic maps: Locus Maps of Complex Genomes.
Locus Candidate for Gene	Pgk2A
Type	RFLP
Synonym	Synonym p20
Chromosome	4H
Map	[ Hide all but 1 of 11 ] Barley-Consensus2-4H 52 Hordeum-Bins-4H 52.8 Hordeum-Consensus2005-SNP-4H 49.484 Hordeum-NABGMP1-4H 63.9 Hordeum-PilotOPA1-4H 50.964 Hordeum-QTLConsensus-Abiotic-4H 49.48 Hordeum-QTLConsensus-Agronomic-4H 49.48 Hordeum-StMo-SNP-4H 51.17 Hordeum-SxM-FeedQTL-4H 63.9 Hv-Consensus2006-Marcel-4H 54.7 Hv-Integrated2009-4H 65.8
	[ Show Nearby Loci ]
Map Data	Barley consensus 2 [ Show all 11 ]
Probe	p20
Candidate Gene	Pgk2 (Hordeum)
Reference	Rostoks N et al. (2005) Genome-wide SNP discovery and linkage analysis in barley based on genes responsive to abiotic stress. Molecular Genetics and Genomics 274:515-527.
Data Source	Blake, Tom 05.04.19 Close, Timothy J.
Remark	Bin on the 'Barley, Integrated, Marcel 2009' Map Set : 'chromosome_kleinhofs & graner BIN nb.subBIN nb' Mapping population(s) used for locus placement on the 'Barley, Integrated, Marcel 2009' Map Set = Steptoe x Morex Loci in 'Barley, Consensus 2006, Marcel' mapped in population(s) : Steptoe x Morex
Possible Orthologs	Pgk2B Xpsr477(Pgk2)-6A Xpsr477(Pgk2)-6B Xpsr477(Pgk2)-6D
Locus Candidate for Gene	Pgk2B
Type	RFLP
Chromosome	7H
Map	[ Hide all but 1 of 6 ] Barley-Consensus2-7H 109.9 Hordeum-NABGMP1-7H 128.7 Hordeum-StMo-SNP-7H 105.65 Hordeum-SxM-FeedQTL-7H 128.7 Hv-Consensus2006-Marcel-7H 111.91 Hv-Integrated2009-7H 113.2
	[ Show Nearby Loci ]
Map Data	Barley consensus 2 [ Show all 6 ]
Probe	p20
Candidate Gene	Pgk2 (Hordeum)
Reference	Rostoks N et al. (2005) Genome-wide SNP discovery and linkage analysis in barley based on genes responsive to abiotic stress. Molecular Genetics and Genomics 274:515-527.
Data Source	Blake, Tom 05.04.19
Remark	Bin on the 'Barley, Integrated, Marcel 2009' Map Set : 'chromosome_kleinhofs & graner BIN nb.subBIN nb' Mapping population(s) used for locus placement on the 'Barley, Integrated, Marcel 2009' Map Set = Steptoe x Morex Loci in 'Barley, Consensus 2006, Marcel' mapped in population(s) : Steptoe x Morex
Possible Orthologs	Pgk2A Xpsr477(Pgk2)-6A Xpsr477(Pgk2)-6B Xpsr477(Pgk2)-6D

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