GrainGenes Marker Report: Pina-D1 (Triticum)
Gene
Pina-D1 (Triticum)
Synonym
Other name DQ363911.1 
Simeone MC et al. (2006) Conserved regulatory elements identified from a comparative puroindoline gene sequence survey of Triticum and Aegilops diploid taxa Journal of Cereal Science 44:21-33.
X69914 Gautier MF et al. (1994) Triticum aestivum puroindolines, two basic cystine rich seed proteins: cDNA sequence analysis and developmental gene expression Plant Molecular Biology 25:43-57.
Synonym Pina-D1
Gene Class
Grain hardness Puroindolines and grain softness protein
Allele
Pina-D1a (Triticum)
[ Show all 18 ]
Locus
Pina-D1
Candidate Locus
TraesCS5D02G004100.1
Reference
[ Hide all but 1 of 12 ] Cheng S et al. (2024) Harnessing Landrace Diversity Empowers Wheat Breeding for Climate Resilience Nature.
Rasheed A et al. (2023) Genome-Informed Discovery of Genes and Framework of Functional Genes in Wheat The Wheat Genome 9.
Tanaka H et al. (2008) Prevalence of puroindoline alleles in wheat from eastern Asia including the discovery of a new SNP in puroindoline b. Plant Genetic Resources 6:142-152.
Simeone MC et al. (2006) Conserved regulatory elements identified from a comparative puroindoline gene sequence survey of Triticum and Aegilops diploid taxa Journal of Cereal Science 44:21-33.
Chang C et al. (2006) Identification of allelic variations of puroindoline genes controlling grain hardness in wheat using a modified denaturing PAGE. Euphytica 152:pages.
Chen F et al. (2006) Molecular and biochemical characterization of puroindoline a and b alleles in Chinese landraces and historical cultivars. Theoretical and Applied Genetics 112:400.
Ikeda TM et al. (2005) Identification of new puroindoline genotypes and their relationship to flour texture among wheat cultivars Journal of Cereal Science 41:1-6.
Gazza L et al. (2005) Genetic and biochemical analysis of common wheat cultivars lacking puroindoline a Theoretical and Applied Genetics 110:470-478.
Gedye KR et al. (2004) Determination and evaluation of the sequence and textural effects of the puroindoline a and puroindoline b genes in a population of synthetic hexaploid wheat Theoretical and Applied Genetics 109:1597-1603.
Tranquilli G et al. (2002) Substitutions and deletions of genes related to grain hardness in wheat and their effect on grain texture Crop Science 42:1812-1817.
Giroux MJ and Morris CF (1997) A glycine to serine change in puroindoline b is associated with wheat grain hardness and low levels of starch-surface friabilin. Theoretical and Applied Genetics 95:857-864.
Gautier MF et al. (1994) Triticum aestivum puroindolines, two basic cystine rich seed proteins: cDNA sequence analysis and developmental gene expression Plant Molecular Biology 25:43-57.
URL
DQ363911 at NCBI X69914 at NCBI Protocols for PCR determination of of Pina and Pinb by CAPs markers at MASWheat
Gene Product
puroindoline a
Chromosome
5D
Chromosome Arm
Germplasm
Cultivar CAPITOLE Gautier MF et al. (1994) Triticum aestivum puroindolines, two basic cystine rich seed proteins: cDNA sequence analysis and developmental gene expression Plant Molecular Biology 25:43-57.
Chinese Spring Simeone MC et al. (2006) Conserved regulatory elements identified from a comparative puroindoline gene sequence survey of Triticum and Aegilops diploid taxa Journal of Cereal Science 44:21-33.
Comment
See Pina-D1 record for ESTs. Curated genes in GrainGenes have the genus in parenthesis following the gene name
Clone
Pina-D1_INS TraesCS5D02G004100
Sequence
TraesCS5D02G004100.1
Data Curator
Blake, Victoria Carollo July2021
Locus Associated with Gene
Pina-D1
Type
Gene
Synonym
Other name Pina-D1a
Chromosome
5D 5D Triticum aestivum
Chromosome Arm
5DS
Map
Wheat-2014-Consensus-Ug99-Update_5D 8.02 Wheat-Composite2004-5D 0
[ Show Nearby Loci ]
Map Data
Wheat, Composite, 2004 Wheat-2014-Consensus-Ug99-Update
Species
Triticum aestivum
Probe
Pina
Associated Gene
Pina-D1 (Triticum)
Gene Class
Grain hardness Puroindolines and grain softness protein
Reference
Beecher B et al. (2002) Expression of wild-type pinB sequence in transgenic wheat complements a hard phenotype Theoretical and Applied Genetics 105:870-877.
Possible Orthologs
Pina Pina-A
Locus Candidate for Gene
TraesCS5D02G004100.1
Type
gene
Synonym
Synonym TraesCS5D03G0008300
Chromosome
5D
Species
Triticum aestivum
Probe
TraesCS5D02G004100
Reference
IWGSC et al. (2018) Shifting the limits in wheat research and breeding using a fully annotated reference genome Science 361.
GrainGenes is a product of the Agricultural Research Service of the US Department of Agriculture.
GrainGenes Marker Report: Pina-D1 (Triticum)
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