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GrainGenes Marker Report: Ppd-D1

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Locus
Ppd-D1
Type
gene
Chromosome
2D
Chromosome Arm
2DS
Map
Wheat_Yr_2021-2D42.5
[ Show Nearby Loci ]
Map Data
Wheat, Yr Update, 2021
Probe
Ppd-D1
Associated Gene
Ppd-D1 (Triticum)
ppd1 (Triticum)
Gene Class
Response to photoperiod
Time to flowering
Reference
ReferenceBeales J et al. (2007) A pseudo-response regulator is misexpressed in the photoperiod insensitive Ppd-D1a mutant of wheat (Triticum aestivum L.). Theoretical and Applied Genetics 115:721.
ReferenceMAS Wheat. Functional Markers for genes affecting agronomic traits in wheat MAS Wheat. Marker Assisted Selection in Wheat.
Possible Orthologs
[ Hide all but 1 of 17 ]
Ppd-B1
Ppd-D1a-2D
Ppd-H1
Ppd-H1 (Hordeum)
Ppd1
ppd2
PpdA
PpdB
PpdD
PSB993(Ppd-H1)
Ppd-A1
ppdB
Ppd-A1-2A
PpdA1
Ppd-B2
ppdB-2A
Xppd



Probe for Locus
Ppd-D1
Locus
Ppd-D1
Reference
ReferenceBeales J et al. (2007) A pseudo-response regulator is misexpressed in the photoperiod insensitive Ppd-D1a mutant of wheat (Triticum aestivum L.). Theoretical and Applied Genetics 115:721.
ReferenceMAS Wheat. Functional Markers for genes affecting agronomic traits in wheat MAS Wheat. Marker Assisted Selection in Wheat.
PCR primers
5' Ppd-D1_F: ACGCCTCCCACTACACTG 3'
5' Ppd-D1_R2: CACTGGTGGTAGCTGAGATT 3' Ppd-D1_R1: GTTGGTTCAAACAGAGAGC
Specificity
Reverse primers are for alleles Ppd-D1a and mutant Ppd-D1b, respectively