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GrainGenes Marker Report: Ppd-H1 (Hordeum)

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Gene	Ppd-H1 (Hordeum)
Gene Class	Response to photoperiod
Allele	Ppd-H1 Igri type (Hordeum) Ppd-H1 Triumph type (Hordeum)
Locus	MWG858 Ppd-H1
Reference	Laurie DA et al. (1994) Genetic analysis of a photoperiod response gene on the short arm of chromosome 2(2H) of Hordeum vulgare (barley). Heredity 72:619-627.
QTL Associated with Gene	Ppd-H1 autumn Ppd-H1 spring
Chromosome	2H
Chromosome Arm	2HS
Comment	A photoperiod response gene that affects flowering time under long days (13h or 16h light) but has little effect under short days (10h). In the field it is the major determinant of flowering time variation in the doubled haploid population. Its map location suggests it may be equivalent to the Ppd series of photoperiod response genes in wheat.
Locus Associated with Gene	MWG858
Type	RFLP
Synonym	Synonym Ppd-H1 (Hordeum)
Chromosome	2H
Chromosome Arm	2HS
Map	Barley-Consensus-2H -29.2 [ Show all 19 ]
	[ Show Nearby Loci ]
In QTL	MetaQ.DON_2H_4 MQTL_Du2024.yield-2H.6
Map Data	[ Hide all but 1 of 19 ] Barley consensus Barley consensus 2 Barley, Abiotic QTL Consensus Barley, Agronomic QTL Consensus Barley, BinMap 2005 Barley, Consensus 2005, SNP Barley, Consensus 2006, DArT Barley, Consensus 2006, Marcel Barley, Consensus 2023, FHB Barley, FxS, FHB QTL Barley, Igri x Franka, SSR Barley, Integrated, Marcel 2009 Barley, IxF Barley, Steptoe x Morex, SNP Barley, Steptoe x Morex, SSAP Barley, Steptoe x Morex, SSR Barley, SxM Barley, SxM basemap Barley, SxM, Feed QTLs
Probe	MWG858
Associated Gene	Ppd-H1 (Hordeum)
Gene Class	Response to photoperiod
Reference	Wenzl P et al. (2006) A high-density consensus map of barley linking DArT markers to SSR, RFLP and STS loci and agricultural traits BMC Genomics 7:206. [ Show all 6 ]
Data Source	Blake, Tom 05.04.19
Remark	Number of populations contributing to the placement of MWG858 in the Barley, Consensus 2006 DArT maps = 1 The MWG858 RFLP/STS is a gene marker for the Ppd-H1 (Hordeum) gene Bin on the 'Barley, Integrated, Marcel 2009' Map Set : 'chromosome_kleinhofs & graner BIN nb.subBIN nb' Mapping population(s) used for locus placement on the 'Barley, Integrated, Marcel 2009' Map Set = Steptoe x Morex,Igri x Franka Loci in 'Barley, Consensus 2006, Marcel' mapped in population(s) : Steptoe x Morex; Igri x Franka
Possible Orthologs	MWG858-2H [ Show all 7 ]
Locus Associated with Gene	Ppd-H1
Type	Gene
Synonym	Synonym Ppd-H1 (Hordeum)
Map	Hordeum-Laurie5-2H 22.5
	[ Show Nearby Loci ]
Map Data	Barley, IxT
Associated Gene	Ppd-H1 (Hordeum)
Gene Class	Response to photoperiod
Possible Orthologs	Ppd-B1 [ Show all 17 ]
Locus	Ppd-H1 (Hordeum)
Type	gene
Synonym	Synonym MWG858 Ppd-H1
Possible Orthologs	Ppd-B1 [ Show all 17 ]

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