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GrainGenes Marker Report: S-A1 (Triticum)

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Gene	S-A1 (Triticum)
Gene Class	Sphaerococcum
Orthologous Gene Set	Sphaerococcum
Allele	S-A1a (Triticum) S-A1b (Triticum)
Locus	S-A1 S3 Xgwm2-3A Xgwm720-3A
Reference	Salina E et al. (2000) Microsatellite mapping of the induced sphaerococcoid mutation genes in Triticum aestivum Theoretical and Applied Genetics 100:686-689. McIntosh RA et al. (2000) Catalogue of gene symbols for wheat: 2000 Supplement Wheat Information Service 91:33-70.
URL	Gene symbol detail in the 'Catalog of Gene Symbols for Wheat' at Komugi
Chromosome	3A Maystrenko OI et al. (1998) The chromosome location of the S1, S2 and S3 genes of induced sphaerococoid mutations in common wheat. EWAC Newsletter 1998:127-130.
Germplasm	Hexaploid stock Chinese Spring
Locus Associated with Gene	S-A1
Type	Trait
Chromosome	3A
Chromosome Arm	3AS
Map	Wheat-Composite2004-3A 77
	[ Show Nearby Loci ]
Species	Triticum aestivum
Probe	WMS2
Associated Gene	S-A1 (Triticum)
Gene Class	Sphaerococcum
Reference	Salina E et al. (2000) Microsatellite mapping of the induced sphaerococcoid mutation genes in Triticum aestivum Theoretical and Applied Genetics 100:686-689.
Remark	Trait marker Xgwm2-3A Nearby marker on Composite map: Xgwm2 Position on Composite map estimated by GrainGenes.
Locus Associated with Gene	S3
Chromosome	3A
Chromosome Arm	3AS
Map	Ta-Sphaerococcoid-3A 50.3
	[ Show Nearby Loci ]
Map Data	Wheat, Sphaerococcoid Genes
Associated Gene	S-A1 (Triticum)
Gene Class	Sphaerococcum
Reference	Salina E et al. (2000) Microsatellite mapping of the induced sphaerococcoid mutation genes in Triticum aestivum Theoretical and Applied Genetics 100:686-689.
Locus Associated with Gene	Xgwm2-3A
Type	Microsatellite
Chromosome	3A
Chromosome Arm	3AS
Map	Chinese_Spring_Deletion_SSR_3A -0.725 [ Show all 13 ]
	[ Show Nearby Loci ]
In QTL	QFhs.ndsu-3AS QFhs.ndsu.3AS
Breakpoint Interval	3AS4-0.45-1.00
Map Data	T. turgidum, Omrabi5 x dicoccoides, QTL [ Show all 13 ]
Probe	WMS2
Linked QTL	QFhs.ndsu-3AS
Associated Gene	S-A1 (Triticum)
Gene Class	Sphaerococcum
Reference	Somers DJ et al. (2004) A high-density wheat microsatellite consensus map for bread wheat (Triticum aestivum L.) Theoretical and Applied Genetics 109:1105-1114. Otto CD et al. (2002) Genetic dissection of a major Fusarium head blight QTL in tetraploid wheat Plant Molecular Biology 48:625-632. Salina E et al. (2000) Microsatellite mapping of the induced sphaerococcoid mutation genes in Triticum aestivum Theoretical and Applied Genetics 100:686-689. Roder MS et al. (1998) A microsatellite map of wheat Genetics 149:2007-2023.
Data Source	Roeder, Marion S. 98.09.15
Remark	In Map Ta-Synthetic/Opata-SSR-3A, the interval most likely to contain locus is between Xcdo638 and Xpsr903
Possible Orthologs	[ Hide all but 1 of 10 ] Xgwm2 Xgwm2-3A.1 Xgwm2-3A.2 Xgwm2-3D Xgwm2a Xgwm2b gwm2 gwm2-2 gwm2-1 gwm2-3A
Locus Associated with Gene	Xgwm720-3A
Type	Microsatellite
Chromosome	3A
Chromosome Arm	3AL
Map	Ta-Sphaerococcoid-3A 56.9
	[ Show Nearby Loci ]
Map Data	Wheat, Sphaerococcoid Genes
Probe	WMS720
Associated Gene	S-A1 (Triticum)
Gene Class	Sphaerococcum
Reference	Salina E et al. (2000) Microsatellite mapping of the induced sphaerococcoid mutation genes in Triticum aestivum Theoretical and Applied Genetics 100:686-689.
Possible Orthologs	Xgwm720 Xgwm720-4R gwm720 gwm720-3A

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