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GrainGenes Marker Report: Tg1

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Locus
Tg1
Type
Trait
Chromosome
2D
Chromosome Arm
2DS
Map
Wheat-Composite2004-2D27
[ Show Nearby Loci ]
Species
Triticum aestivum
Probe
WMC112
Associated Gene
Tg1 (Triticum)
Gene Class
Tenacious glumes
Reference
ReferenceNalam VJ et al. (2007) Map-based analysis of genetic loci on chromosome 2D that affect glume tenacity and threshability, components of the free-threshing habit in common wheat (Triticum aestivum L.). Theoretical and Applied Genetics 116:135.
Remark
Trait marker Xwmc112-2D, Xbarc168-2D
Nearby marker on Composite map: Xwmc112y, Xbarc168
Position on Composite map estimated by GrainGenes.



Probe for Locus
WMC112
Locus
[ Hide all but 1 of 6 ]
Xwmc112-2D
Xwmc112
Xwmc112y
Tg1
wmc112
wmc112-2D
Reference
ReferenceSomers DJ and Isaac P (2004) SSRs from the Wheat Microsatellite Consortium.
General Remarks
Wheat Microsatellite Consortium Project 1, Plate reference 8g8
Donor: Flore, Verneuil
Location from nullisomic/tetrasomic (Daryl Somers, AgCanada, Feb 2001) : 251 bases located on 5B
AGR170. Trimmed to Rsa1 at both ends. (CA)17 202 to 235, (CT)34 134 to 201. Good clear polymorphism (1 locus).
Type
PCR
SSR
PCR primers
Forward TgAgTTgTggggTcTTgTTTgg at 105 length 22 bases, Tm 66.0
Reverse TgAAggAgggcAcATATcgTTg at 328 length 22 bases, Tm 66.0
SSR size
245 bases expected, Chinese Spring
Amplification Conditions
61C anneal, polymorphic product on agarose; 61C anneal, polymorphic on acrylamide;
Sequence
WMC112
Source Species
Triticum aestivum