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GrainGenes Marker Report: Ubi2

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Locus	Ubi2
Type	RFLP
Synonym	Synonym pKG3730
Chromosome	5H
Chromosome Arm	5HS
Map	Barley-Consensus-5H -6.1 [ Show all 15 ]
	[ Show Nearby Loci ]
QTL with Locus Marker	QCww.StMo-5H
Map Data	[ Hide all but 1 of 15 ] Barley consensus Barley consensus 2 Barley, Abiotic QTL Consensus Barley, Agronomic QTL Consensus Barley, BinMap 2005 Barley, Consensus 2005, SNP Barley, Consensus 2006, DArT Barley, Consensus 2006, Marcel Barley, Integrated, Marcel 2009 Barley, Pilot OPA1, Consensus Barley, Steptoe x Morex, SNP Barley, Steptoe x Morex, SSAP Barley, SxM Barley, SxM basemap Barley, SxM, Feed QTLs
Probe	pKG3730
Reference	Wenzl P et al. (2006) A high-density consensus map of barley linking DArT markers to SSR, RFLP and STS loci and agricultural traits BMC Genomics 7:206. Rodriguez M et al. (2006) Integration of retrotransposons-based markers in a linkage map of barley. Molecular Breeding 17:173-184. Rostoks N et al. (2005) Genome-wide SNP discovery and linkage analysis in barley based on genes responsive to abiotic stress. Molecular Genetics and Genomics 274:515-527.
Data Source	Blake, Tom 05.04.19 Close, Timothy J.
Remark	Number of populations contributing to the placement of Ubi1 in the Barley, Consensus 2006 DArT maps = 1 Bin on the 'Barley, Integrated, Marcel 2009' Map Set : 'chromosome_kleinhofs & graner BIN nb.subBIN nb' Mapping population(s) used for locus placement on the 'Barley, Integrated, Marcel 2009' Map Set = Steptoe x Morex Loci in 'Barley, Consensus 2006, Marcel' mapped in population(s) : Steptoe x Morex
Possible Orthologs	Ubi1 Ubi4 Ubi5
Probe for Locus	pKG3730
Locus	Ubi2 [ Show all 6 ]
Reference	Gausing K and Barkardottir R (1986) Structure and expression of ubiquitin genes in higher plants European Journal of Biochemistry 158:57-62.
Type	cDNA
Linkage Group	Barley 1 (7H) Barley 7 (5H) 6
Source Gene Class	Polyubiquitin
Source Gene	Ubi1 (Hordeum)
Source Species	Hordeum vulgare
Insert Size	0.702 0.8