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GrainGenes Marker Report: Vrn1

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Gene	Vrn1 (Triticum)
Synonym	Other name Vrn-A1 (Triticum) Synonym AP1 (Triticum)
Gene Class	Response to vernalization (Triticum)
Allele	Vrn1 (Triticum) vrn1 (Triticum)
Locus	vrn-A1-5A Vrn1
Candidate Locus	AP1
Reference	Santra DK et al. (2009) Genetic and Molecular Characterization of Vernalization Genes Vrn-A1, Vrn-B1, and Vrn-D1 in Spring Wheat Germplasm from the Pacific Northwest Region of the U.S.A. Plant Breeding 128:576-584. [ Show all 8 ]
URL	Vrn-1 gene at Komugi: Catalogue of Gene Symbols for Wheat
Gene Product	AP1 MADS box transcription factor MADS-box transcriptional factor VRN1 VRN1
Chromosome Arm	5AL Law CN et al. (1976) The genetic control of ear emergence time by chromosomes 5A and 5D of wheat. Heredity 36:49-58.
Germplasm	Hexaploid stock Borsum PBA-14-42 Plant Breeding Abstracts 14:42. [ Show all 28 ]
Comment	Kuspira et al. (1986) attributed single gene variation in T. monococcum to the Vrn1/vrn1 locus. Multiple recessive alleles were suggested. The Vrn-1 gene encodes a MADS-box transcription factor closely related to the Arabidopsis AP1/FRUITFULL family, responsible for the transition of the shoot apical meristem from the vegetative to reproductive stage in wheat (Yan et al., 2003). Deletions in the promoter (Vrn-A1a, Vrn-A1b) (Yan, Helguera, et al., 2004), or the first intron of this gene (Vrn-A1c, Vrn-B1a, Vrn-D1a) (Fu et al., 2005) are the most common sources of spring growth habit among landraces and commercial cultivars of polyploid wheat worldwide (Zhang et al., 2008; Santra et al., 2009; Iqbal et al., 2007).
Clone	AY244508/9
Sequence	[ Hide all but 1 of 275 ] DQ291016 DQ291016_1.cds DQ291017 DQ291017_1.cds DQ291018 DQ291018_1.cds DQ291019 DQ291019_1.cds DQ291020 DQ291020_1.cds DQ291021 DQ291021_1.cds DQ291022 DQ291022_1.cds DQ291023 DQ291023_1.cds DQ291024 DQ291024_1.cds DQ291025 DQ291025_1.cds DQ291026 DQ291026_1.cds DQ291027 DQ291027_1.cds DQ291028 DQ291028_1.cds DQ291029 DQ291029_1.cds DQ291030 DQ291030_1.cds DQ291031 DQ291031_1.cds DQ291032 DQ291032_1.cds DQ291033 DQ291033_1.cds DQ291034 DQ291034_1.cds DQ291035 DQ291035_1.cds DQ291036 DQ291036_1.cds DQ291037 DQ291037_1.cds DQ291038 DQ291038_1.cds DQ291039 DQ291039_1.cds DQ291040 DQ291040_1.cds DQ291041 DQ291041_1.cds DQ291042 DQ291042_1.cds DQ291043 DQ291043_1.cds DQ291044 DQ291044_1.cds DQ291045 DQ291045_1.cds DQ291046 DQ291046_1.cds DQ291047 DQ291047_1.cds DQ291048 DQ291048_1.cds DQ291049 DQ291049_1.cds DQ291050 DQ291050_1.cds DQ291051 DQ291051_1.cds DQ291052 DQ291052_1.cds DQ291053 DQ291053_1.cds DQ291054 DQ291054_1.cds DQ291055 DQ291055_1.cds DQ291056 DQ291056_1.cds DQ291057 DQ291057_1.cds DQ291058 DQ291058_1.cds DQ291059 DQ291059_1.cds DQ291060 DQ291060_1.cds DQ291061 DQ291061_1.cds DQ291062 DQ291062_1.cds DQ291063 DQ291063_1.cds DQ291064 DQ291064_1.cds DQ291065 DQ291065_1.cds DQ291066 DQ291066_1.cds DQ291067 DQ291067_1.cds DQ291068 DQ291068_1.cds DQ291069 DQ291069_1.cds DQ291070 DQ291070_1.cds DQ291071 DQ291071_1.cds DQ291072 DQ291072_1.cds DQ291073 DQ291073_1.cds DQ291074 DQ291074_1.cds DQ291075 DQ291075_1.cds DQ291076 DQ291076_1.cds DQ291077 DQ291077_1.cds DQ291078 DQ291078_1.cds DQ291079 DQ291079_1.cds DQ291080 DQ291080_1.cds DQ291081 DQ291081_1.cds DQ291082 DQ291082_1.cds DQ291083 DQ291083_1.cds DQ291084 DQ291085 DQ291085_1.cds DQ291086 DQ291086_1.cds DQ291087 DQ291087_1.cds DQ291088 DQ291088_1.cds DQ291089 DQ291089_1.cds DQ291090 DQ291090_1.cds DQ291091 DQ291091_1.cds DQ291092 DQ291092_1.cds DQ291093 DQ291093_1.cds DQ291094 DQ291094_1.cds DQ291095 DQ291095_1.cds DQ291096 DQ291096_1.cds DQ291097 DQ291097_1.cds DQ291098 DQ291098_1.cds DQ291099 DQ291099_1.cds DQ291100 DQ291100_1.cds DQ291101 DQ291101_1.cds DQ291102 DQ291102_1.cds DQ291103 DQ291103_1.cds DQ291104 DQ291104_1.cds DQ291105 DQ291105_1.cds DQ291106 DQ291106_1.cds DQ291107 DQ291107_1.cds DQ291108 DQ291108_1.cds DQ291109 DQ291109_1.cds DQ291110 DQ291110_1.cds DQ291111 DQ291111_1.cds DQ291112 DQ291112_1.cds DQ291115 DQ291115_1.cds DQ291116 DQ291116_1.cds DQ291117 DQ291117_1.cds DQ291118 DQ291118_1.cds DQ291119 DQ291119_1.cds DQ291120 DQ291120_1.cds DQ291121 DQ291121_1.cds DQ291122 DQ291122_1.cds DQ291123 DQ291123_1.cds DQ291124 DQ291124_1.cds DQ291125 DQ291125_1.cds DQ364935 DQ364935_1.cds DQ364936 DQ364936_1.cds DQ364937 DQ364937_1.cds DQ364938 DQ364938_1.cds DQ364939 DQ364939_1.cds DQ364940 DQ364940_1.cds DQ364941 DQ364941_1.cds DQ364942 DQ364942_1.cds DQ364943 DQ364943_1.cds DQ364944 DQ364944_1.cds DQ364945 DQ364945_1.cds DQ364946 DQ364946_1.cds DQ364947 DQ364947_1.cds DQ364948 DQ364948_1.cds DQ364949 DQ364949_1.cds DQ364950 DQ364950_1.cds DQ364951 DQ364951_1.cds DQ364952 DQ364952_1.cds DQ364953 DQ364953_1.cds DQ364954 DQ364954_1.cds DQ364955 DQ364955_1.cds DQ364956 DQ364956_1.cds EF382983 EF382983_1.cds EF382984 EF382984_1.cds EF382985 EF382985_1.cds EF382986 EF382986_1.cds EF382987 EF382987_1.cds EF382988 EF382988_1.cds EU875079 EU875079_1.cds EU875080 EU875080_1.cds
2 Point Data	Vrn1/AP1 Vrn1/Xbcd450
Data Source	Dubcovsky, Jorge 2003.04
Data Curator	Cooper, Laurel Oct-2020 Hart, Gary E. 96.03.24
Locus Associated with Gene	vrn-A1-5A
Synonym	Other name Vrn-A1 Vrn1
Map	CS/SQ1-5A 117
	[ Show Nearby Loci ]
In QTL	QYld.saq-5A
Map Data	Wheat, Chinese Spring x SQ1
Associated Gene	Vrn1 (Triticum)
Gene Class	Response to vernalization (Triticum)
Locus Candidate for Gene	AP1
Type	CAPS
Chromosome	5A
Chromosome Arm	5AL
Map	5AL, Vrn1 region 0
	[ Show Nearby Loci ]
Map Data	5AL, Vrn1 region
2 Point Data	Vrn1/AP1
Species	Triticum monococcum
Probe	AY244508/9
Candidate Gene	Vrn1 (Triticum)
Reference	Yan L et al. (2003) Positional cloning of the wheat vernalization gene VRN1 Proceedings of the National Academy of Sciences, USA 100:6263-6268.
Data Source	Dubcovsky, Jorge 2003.04
Locus	Vrn1
Type	Gene
Synonym	Other name Vrn-A1 vrn-A1-5A
Chromosome	5A
Chromosome Arm	5AL
Map	5AL, Vrn1 region 0 Ta-Synthetic/Opata-5A 81.9 Triticum-Genes-5A 9.4 Wheat-Composite2004-5A 66
	[ Show Nearby Loci ]
Map Data	5AL, Vrn1 region Wheat genes Wheat, Composite, 2004 Wheat, Synthetic x Opata  [ GBrowser ]
2 Point Data	Centromere/Vrn1#1 [ Show all 6 ]
Species	Triticum monococcum
Associated Gene	Vrn1 (Triticum)
Gene Class	Response to vernalization (Triticum)
Reference	Yan L et al. (2003) Positional cloning of the wheat vernalization gene VRN1 Proceedings of the National Academy of Sciences, USA 100:6263-6268. Law CN et al. (1976) The genetic control of ear emergence time by chromosomes 5A and 5D of wheat. Heredity 36:49-58.
Data Source	Dubcovsky, Jorge 2003.04

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