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GrainGenes Marker Report: WG380B

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Locus
WG380B
Type
RFLP
Synonym
Synonymlks2 (Hordeum)
Chromosome
7H
Map
[ Hide all but 1 of 13 ]
Barley-Consensus2-7H100.5
Hordeum-Bins-7H95
Hordeum-Consensus2005-SNP-7H110.429
Hordeum-OWB-2004-7H121.1
Hordeum-OWB-2005-7H126.8
Hordeum-OWB-7H107.1
Hordeum-OWB-OPA2008-7H122.249
Hordeum-OWB-SNP-7H116.26
Hordeum-QTLConsensus-Abiotic-7H110.43
Hordeum-QTLConsensus-Agronomic-7H110.43
Hv-Consensus2006-Marcel-7H98.29
Hv-Integrated2009-7H99.4
Tt-Gill-7D403
[ Show Nearby Loci ]
Map Data
Barley consensus 2
[ Show all 13 ]
Species
Hordeum vulgare
Probe
WG380
Associated Gene
lks2 (Hordeum)
Gene Class
Short awned
Reference
ReferenceSzucs P et al. (2009) An Integrated Resource for Barley Linkage Map and Malting Quality QTL Alignment The Plant Genome 2:134-140.
ReferenceRostoks N et al. (2005) Genome-wide SNP discovery and linkage analysis in barley based on genes responsive to abiotic stress. Molecular Genetics and Genomics 274:515-527.
ReferenceCosta JM et al. (2001) Molecular mapping of the Oregon Wolfe Barleys: a phenotypically polymorphic doubled-haploid population Theoretical and Applied Genetics 103:415-424.
Data Source
Kleinhofs, Andris
Remark
This marker is a Binlocus in the Hordeum-Bins maps, i.e. a marker mapped in other crosses and located to the Steptoe x Morex bin
Bin on the 'Barley, Integrated, Marcel 2009' Map Set : 'chromosome_kleinhofs & graner BIN nb.subBIN nb'
Mapping population(s) used for locus placement on the 'Barley, Integrated, Marcel 2009' Map Set = Oregon Wolfe Barleys
Loci in 'Barley, Consensus 2006, Marcel' mapped in population(s) : Oregon Wolfe Dom x Rec
Possible Orthologs
WG380
[ Show all 9 ]
Probe for Locus
WG380
Locus
WG380A
[ Show all 11 ]
Type
Genomic
Polymorphism
WG380 XbaI
WG380 EcoRI
WG380 EcoRV
WG380 HindIII
Linkage Group
[b 1H, 1LH]
Insert Enzyme
PstI
Source Species
Triticum aestivum
Source Germplasm
Chinese Spring
Insert Size
1.6