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GrainGenes Marker Report: WG996

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Locus
WG996
Type
RFLP
Synonym
SynonymWG996
Chromosome
2H
Chromosome Arm
2HL
Map
[ Hide all but 1 of 15 ]
Barley-Consensus-2H0.6
Barley-Consensus2-2H71
Hordeum-Bins-2H71.5
Hordeum-Consensus2005-SNP-2H66.585
Hordeum-Consensus2006-DArT-2H77.4
Hordeum-CxH-2H94.55
Hordeum-CxS-2H82.97
Hordeum-GxH-2H76.91
Hordeum-NABGMP1-2H72.8
Hordeum-QTLConsensus-Abiotic-2H66.58
Hordeum-QTLConsensus-Agronomic-2H66.58
Hordeum-StMo-SNP-2H67.14
Hordeum-SxM-FeedQTL-2H72.8
Hv-Consensus2006-Marcel-2H70.93
Hv-Integrated2009-2H67.4
[ Show Nearby Loci ]
Map Data
Barley consensus
[ Show all 15 ]
Probe
WG996
Reference
ReferenceWenzl P et al. (2006) A high-density consensus map of barley linking DArT markers to SSR, RFLP and STS loci and agricultural traits BMC Genomics 7:206.
ReferenceRostoks N et al. (2005) Genome-wide SNP discovery and linkage analysis in barley based on genes responsive to abiotic stress. Molecular Genetics and Genomics 274:515-527.
Data Source
Blake, Tom05.04.19
Remark
Number of populations contributing to the placement of WG996 in the Barley, Consensus 2006 DArT maps = 1
Bin on the 'Barley, Integrated, Marcel 2009' Map Set : 'chromosome_kleinhofs & graner BIN nb.subBIN nb'
Mapping population(s) used for locus placement on the 'Barley, Integrated, Marcel 2009' Map Set = Steptoe x Morex
Loci in 'Barley, Consensus 2006, Marcel' mapped in population(s) : Steptoe x Morex
Possible Orthologs
WG996a
[ Show all 9 ]



Probe
WG996
Locus
Xwg996-2
[ Show all 10 ]
Reference
ReferenceHeun M et al. (1991) Construction of a restriction fragment length polymorphism map for barley (Hordeum vulgare) Genome 34:437-447.
Type
Genomic
STS
PCR primers
CCT TCA CTG ACC CCT AAA TA
AGC CCA GGT TCT ACA ACA AC
Sequence
WG996
Polymorphism
WG996 DraI
Linkage Group
[b 2LS]
2
Insert Enzyme
PstI
Source Species
Triticum aestivum
Insert Size
1