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GrainGenes Marker Report: WMS247

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Probe
WMS247
Locus
[ Hide all but 1 of 8 ]
Xgwm247
Xgwm247-3A
Xgwm247-3B
Xgwm247.1-1B
Xgwm247-6R
gwm247
gwm247-3B
gwm247-3A
Reference
ReferenceFu YB et al. (2007) Microsatellite variation in Avena sterilis oat germplasm Theoretical and Applied Genetics 114:1029-1038.
ReferenceRoder MS et al. (1998) A microsatellite map of wheat Genetics 149:2007-2023.
Remarks
Insert contains repeat (GA)24
PRIMER SEQUENCE IS AVAILABLE FOR PUBLIC RESEARCH ONLY. REQUESTS FOR COMMERCIAL USE SHOULD BE DIRECTED TO M. ROEDER.
In 369 Avena sterilis accessions there were 4 alleles of size 39-60 bp, PIC = 0.04.
Type
Genomic
PCR
SSR
PCR primers
5' GCAATCTTTTTTCTGACCACG 3'
5' ATGTGCATGTCGGACGC 3'
Amplification Conditions
3 min at 94 deg C; 45 cycles with 1 min at 94 deg C, 1 min at 55 deg C, and 2 min at 72 deg C; and a final extension step of 10 min at 72 deg C
Polymorphism
WMS247
Source Species
Triticum aestivum
Source Germplasm
Chinese Spring