GrainGenes Marker Report: Xbarc141-5A
Locus
Xbarc141-5A
Type
Microsatellite
Chromosome
5A
Map
[ Hide all but 1 of 6 ] Chinese_Spring_Deletion_SSR_5A 0.46 Conan/Reeder-5A 45.3282 CS/SQ1-5A 46.5 T.b.xT.m.-5A 83 Ta-SSR-2004-5A 63.9 Ta-Synthetic/Opata-BARC-5A 45.3
[ Show Nearby Loci ]
Breakpoint Interval
5AL12-0.35-0.57
Map Data
Durum wheat, Svevo x Ciccio
[ Show all 7 ]
Probe
BARC141
Reference
Somers DJ et al. (2004) A high-density wheat microsatellite consensus map for bread wheat (Triticum aestivum L.) Theoretical and Applied Genetics 109:1105-1114.
Possible Orthologs
Xbarc141 Xbarc141-6B Xbarc141.1-5A barc141 barc141-5A
Probe for Locus
BARC141
Locus
Xbarc141-5A
[ Show all 6 ]
General Remarks
Contains motif : (GA)11 BARC primer pairs are developed by P. Cregan, Q. Song and associates at the USDA-ARS Beltsville Agriculture Research Station. Meiotic map information was developed by J.R. Shi, R. Ward and associates at Michigan State University. Deletion map information was developed by B.Gill, S. Singh and associates at Kansas State University. Funding for this research is provided by USDA-ARS in conjunction with the U.S. Wheat and Barley Scab Initiative.
Type
PCR SSR
PCR primers
5' GGCCCATGGATAATTTTTGAAATG 3'
5' CAATTCGGCCAAAGAAGAAGTCA 3'
Amplification Conditions
Annealing temperature = 52
Sequence
BV211625
Source Species
Triticum aestivum
GrainGenes Marker Report: Xbarc141-5A
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