GrainGenes Marker Report: Xbarc142-5B
Locus
Xbarc142-5B
Type
Microsatellite
Chromosome
5B
Map
Chinese_Spring_Deletion_SSR_5B 0.775 Kofa/UC1113-5B 121 Louise/Penawawa-5B 118.8 Ta-SSR-2004-5B 129.6 Ta-Synthetic/Opata-BARC-5B 106.3
[ Show Nearby Loci ]
Breakpoint Interval
5BL9-0.76-0.79
Map Data
Durum wheat, Kofa x UC1113 Wheat, Consensus SSR, 2004 Wheat, Louise x Penawawa Wheat, Physical, SSR Wheat, Synthetic x Opata, BARC
Probe
BARC142
Reference
Somers DJ et al. (2004) A high-density wheat microsatellite consensus map for bread wheat (Triticum aestivum L.) Theoretical and Applied Genetics 109:1105-1114.
Possible Orthologs
Xbarc142
[ Show all 7 ]
Probe for Locus
BARC142
Locus
[ Hide all but 1 of 8 ] Xbarc142-2D Xbarc142-5A Xbarc142-6A Xbarc142-5B Xbarc142 barc142 barc142-5A barc142-5B
General Remarks
Contains motif : (CT)13 BARC primer pairs are developed by P. Cregan, Q. Song and associates at the USDA-ARS Beltsville Agriculture Research Station. Meiotic map information was developed by J.R. Shi, R. Ward and associates at Michigan State University. Deletion map information was developed by B.Gill, S. Singh and associates at Kansas State University. Funding for this research is provided by USDA-ARS in conjunction with the U.S. Wheat and Barley Scab Initiative.
Type
PCR SSR
PCR primers
5' CCGGTGAGAGGACTAAAA 3'
5' GGCCTGTCAATTATGAGC 3'
Amplification Conditions
Annealing temperature = 52
Sequence
BV211626
Source Species
Triticum aestivum
GrainGenes Marker Report: Xbarc142-5B
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