GrainGenes Marker Report: Xbcd855-2A
Locus
Xbcd855-2A
Type
RFLP
Chromosome
2A
Chromosome Arm
2A 2AS
Map
[ Hide all but 1 of 6 ] Ta-Synthetic/Opata-2A 119.6 Ta-Synthetic/Opata-BARC-2A 76.9 Ta-Synthetic/Opata-GPW-2A 106.3 Tturgidum-MxM-2A -3.7 Tturgidum-MxM-AFLP-2A 80.6 Tturgidum-SSR-2A -12.3
[ Show Nearby Loci ]
Map Data
T. turgidum, Messapia x dicoccoides
[ Show all 6 ]
Probe
BCD855
Homology
AAG37879.1 e-value: 7e-11 (AF303397) calmodulin-binding protein [Arabidopsis thaliana] AF096260_1 e-value: 3e-21 (AF096260) ER66 protein [Lycopersicon esculentum]
Possible Orthologs
bcd855
[ Show all 8 ]
Probe for Locus
BCD855
Locus
Xbcd855-2
[ Show all 11 ]
Synonym
Synonym HAR35_5518
Related Probe
BCD1086 BCD1307
Hybridization_homologue: The two clones were isolated independently but exhibit the same RFLP patterns when hybridized to DNA from test genotypes, and thus are closely related in sequence.
Reference
Heun M et al. (1991) Construction of a restriction fragment length polymorphism map for barley (Hordeum vulgare) Genome 34:437-447.
General Remarks
Lambda ZAP II library Bar.LambZAPII [c] Bar.LambZAPII
Type
cDNA
Sequence
BE438987 BE439016 BCD855_WHE05B08.s1 BCD855-5
Polymorphism
BCD855 EcoRI
Linkage Group
2S
Insert Enzyme
EcoRI
Source Species
Hordeum vulgare
Source Germplasm
Willis
Source Tissue
etiolated leaf
Insert Size
0.7
PCR size
0.7
GrainGenes Marker Report: Xbcd855-2A
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