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GrainGenes Marker Report: Xcdo1090E

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Locus	Xcdo1090E
Type	RFLP
Map	Oat-1997-KxO-QTL_14 34.4 Oat-2004-KxO-RGA_KO14 5.76 Oat-KxO-14 34.4
	[ Show Nearby Loci ]
QTL with Locus Marker	QHTNV.1997-KxO_14 QHTV.1997-KxO_14
Map Data	Oat, KxO Oat-1997-KxO-QTL Oat-2004-KxO-RGA
Probe	CDO1090
Homology	CAA67191.1 e-value: 2e-12 (X98582) HSP80-2 [Triticum aestivum] HS82_ORYSA e-value: 1e-43 HEAT SHOCK PROTEIN 82
Image	CDO1090 KO autoradiogram
Possible Orthologs	cdo1090 [ Show all 20 ]
Probe for Locus	CDO1090
Locus	[ Hide all but 1 of 21 ] Xcdo1090-2A Xcdo1090-5A Xcdo1090C cdo1090a cdo1090b cdo1090c cdo1090d cdo1090e Xcdo1090A Xcdo1090B Xcdo1090D Xcdo1090E Xcdo1090-2B Xcdo1090-6A cdo1090 CDO1090A CDO1090B CDO1090C CDO1090D CDO1090E cdo1090x
Related Probe	CDO57
	Hybridization_homologue: The two clones were isolated independently but exhibit the same RFLP patterns when hybridized to DNA from test genotypes, and thus are closely related in sequence.
Reference	Wight CP et al. (2004) Discovery, localization, and sequence characterization of molecular markers for the crown rust resistance genes Pc38, Pc39, and Pc48 in cultivated oat (Avena sativa L.) Molecular Breeding 14:349-361. Heun M et al. (1991) Construction of a restriction fragment length polymorphism map for barley (Hordeum vulgare) Genome 34:437-447.
General Remarks	Uni-ZAP XR library
Type	cDNA
Sequence	BE439335 BE439366 CDO1090_WHE05F10.s1 CN180767
Polymorphism	CDO1090 EcoRV CDO1090 XbaI CDO1090 EcoRI CDO1090 HindIII CDO1090 DraI
Source Species	Avena sativa
Source Germplasm	Brooks (oat)
Source Tissue	etiolated leaf
PCR size	0.9