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GrainGenes Marker Report: Xcdo1188

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Locus	Xcdo1188
Type	RFLP
Chromosome	1A 1D 1R
Chromosome Arm	1AS 1DS 1RS
Map	[ Hide all but 1 of 8 ] 1AS, T.m. G1777 x G2528 -0.7 Rye-2009-Consensus-1R 29.1 Secale-Devos-1R -2.1 Secale-DxR-RAPD-1R 73.1 Ta-Physical-Gill-1ABD -57 Ta-Physical-Gill-1D -1.69 Tm-Dubcovsky-1A -1.4 TmTa-Dubcovsky-1A 0
	[ Show Nearby Loci ]
Breakpoint Interval	1DS-2/1DS-1 1S-0.56-0.58
Map Data	1AS, T.m. G1777 x G2528 [ Show all 7 ]
Species	Triticum aestivum
Probe	CDO1188
Homology	ALA2_HORVU e-value: 3e-18 ALANINE AMINOTRANSFERASE 2 (GPT) (GLUTAMIC--PYRUVIC TRANSAMINASE 2) (GLUTAMIC--ALANINE TRANSAMINASE 2) (ALAAT-2)
Reference	Boyko EV et al. (1999) A high-density genetic linkage map of Aegilops tauschii, the D-genome progenitor of bread wheat. Theoretical and Applied Genetics 99:16-26.
Possible Orthologs	CDO1188 [ Show all 7 ]
Probe for Locus	CDO1188
Locus	CDO1188 [ Show all 9 ]
Synonym	Synonym HAR35_27721
Reference	Heun M et al. (1991) Construction of a restriction fragment length polymorphism map for barley (Hordeum vulgare) Genome 34:437-447.
General Remarks	Uni-ZAP XR library OatUni-ZAPXR [c] OatUni-ZAPXR
Type	cDNA
Sequence	BE439209 CDO1188_WHE03F04.r1
Polymorphism	CDO1188 EcoRI
Linkage Group	1S
Insert Enzyme	EcoRI XhoI
Source Species	Avena sativa
Source Germplasm	Brooks (oat)
Source Tissue	etiolated leaf
Insert Size	2
PCR size	2