GrainGenes Marker Report: Xcdo1189-5A
Locus
Xcdo1189-5A
Type
RFLP
Chromosome
5A
Chromosome Arm
5AL
Map
5AL, q deletions 64.5
[ Show Nearby Loci ]
Breakpoint Interval
5AL-q36/5AL-q24
Map Data
5AL, CS q deletions, physical
Probe
CDO1189
Homology
ILV5_ARATH e-value: 1e-05 KETOL-ACID REDUCTOISOMERASE PRECURSOR (ACETOHYDROXY-ACID REDUCTOISOMERASE) (ALPHA-KETO-BETA-HYDROXYLACIL REDUCTOISOMERASE) [Arabidopsis thaliana] [Arabidopsis thaliana]
Possible Orthologs
[ Hide all but 1 of 6 ] CDO1189 Xcdo1189 Xcdo1189-1B Xcdo1189-1D cdo1189 cdo1189-1B
Probe for Locus
CDO1189
Locus
Xcdo1189-1B
[ Show all 11 ]
Synonym
Synonym HAR35_48153 HAR35_49183 HAR35_730
Related Probe
BCD1514
Hybridization_homologue: The two clones were isolated independently but exhibit the same RFLP patterns when hybridized to DNA from test genotypes, and thus are closely related in sequence.
Reference
Heun M et al. (1991) Construction of a restriction fragment length polymorphism map for barley (Hordeum vulgare) Genome 34:437-447.
General Remarks
Uni-ZAP XR library OatUni-ZAPXR [c]
Type
cDNA
Sequence
BE439330 CDO1189_WHE05E09.s1
Polymorphism
CDO1189 EcoRV CDO1189 EcoRI CDO1189 HindIII CDO1189 DraI CDO1189 XbaI
Linkage Group
5L
Insert Enzyme
EcoRI XhoI
Source Species
Avena sativa
Source Germplasm
Brooks (oat)
Source Tissue
etiolated leaf
Insert Size
1.3
PCR size
1.3
GrainGenes Marker Report: Xcdo1189-5A
|
| ||||||||
|
| ||||||||
|
| ||||||||
|
| ||||||||
|
| ||||||||
| |||||||||
|
| ||||||||
|
| ||||||||
|
| ||||||||
|
| ||||||||
|
| ||||||||
|
| ||||||||
|
| ||||||||
|
| ||||||||
|
| ||||||||
| |||||||||
|
| ||||||||
|
| ||||||||
|
| ||||||||
|
| ||||||||
|
| ||||||||
|
| ||||||||
|
| ||||||||
|
| ||||||||
|
| ||||||||
|
| ||||||||
|
| ||||||||
|
|