GrainGenes Marker Report: Xcdo1333
Locus
Xcdo1333
Type
RFLP
Chromosome
4D 5D
Chromosome Arm
4DL 5DL
Map
Ta-Physical-Gill-4ABD 91 Ta-Physical-Gill-4D 4.94 Ta-Physical-Gill-5ABD 93 Tm-Dubcovsky2-5A 86
[ Show Nearby Loci ]
Breakpoint Interval
4DL-12/0 4L-0.86-0.95 5L-0.85-1.00
Map Data
T. monococcum, DV92 x G3116 Wheat, Physical
Species
Triticum aestivum
Probe
CDO1333
Homology
BAA09598.1 e-value: 2e-07 (D58424) Myb-like DNA binding protein [Arabidopsis thaliana] T08964 e-value: 1e-15 hypothetical protein F19B15.120 - Arabidopsis thaliana
Reference
Boyko EV et al. (1999) A high-density genetic linkage map of Aegilops tauschii, the D-genome progenitor of bread wheat. Theoretical and Applied Genetics 99:16-26.
Possible Orthologs
CDO1333 CDO1333B
Probe for Locus
CDO1333
Locus
[ Hide all but 1 of 9 ] Xcdo1333 HI013G24 HI014J6 HI016C10 HD031A7 D1.1_ctg3638 D1.1_ctg3855 CDO1333 CDO1333B
Synonym
Synonym HAR35_18060
Reference
Heun M et al. (1991) Construction of a restriction fragment length polymorphism map for barley (Hordeum vulgare) Genome 34:437-447.
General Remarks
Uni-ZAP XR library OatUni-ZAPXR [c]
Type
cDNA
Sequence
BE439154 BE439223 CDO1333_WHE03C08.r1 CDO1333_WHE03C08.s1
Linkage Group
5L
Insert Enzyme
EcoRI XhoI
Source Species
Avena sativa
Source Germplasm
Brooks (oat)
Source Tissue
etiolated leaf
Insert Size
1.6
PCR size
1.6
GrainGenes Marker Report: Xcdo1333
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