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GrainGenes Marker Report: Xcdo370

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Locus	Xcdo370
Type	RFLP
Chromosome	2B
Map	Oat-2001-KxO_5 7.5 Oat-KxO-5 7.8 Oat-KxO/AFLP-5-30 100 Oat-KxO/Q-5 7.8 Wheat-Composite2004-2B 79
	[ Show Nearby Loci ]
QTL with Locus Marker	Test weight, KxO-5-a Test weight, KxO-5-b Test weight, KxO-5-c Test weight, KxO-5-d Test weight, KxO-5-e
Map Data	Oat, KxO Oat, KxO, AFLP Oat, KxO/QTL Oat-2001-KxO Wheat, Composite, 2004
Probe	CDO370
Homology	RS8_ORYSA e-value: 2e-27 40S RIBOSOMAL PROTEIN S8
Image	CDO370 KO autoradiogram
Reference	Jin H et al. (2000) Combined AFLP and RFLP mapping in two hexaploid oat recombinant inbred populations Genome 94-101.
Possible Orthologs	CDO370 Xcdo370-2 Xcdo370-2B Xcnl.CDO370 cdo370
Probe for Locus	CDO370
Locus	[ Hide all but 1 of 6 ] Xcdo370-2 CDO370 Xcdo370 Xcdo370-2B Xcnl.CDO370 cdo370
Synonym	Synonym HAR35_14503 HAR35_14504 HAR35_29816
External Databases	DDBJ EMBL GenBank
Reference	Heun M et al. (1991) Construction of a restriction fragment length polymorphism map for barley (Hordeum vulgare) Genome 34:437-447.
General Remarks	Uni-ZAP XR library OatUni-ZAPXR [c] OatUni-ZAPXR
Type	cDNA STS
PCR primers	GCT CTC CGC CTG GAT ACA GC CCC TTG CCC TTC TTC TTC TG
Sequence	BE439107 CDO370_WHE2E0051 CDO370_WHE2E0052 CDO370
Polymorphism	CDO370 EcoRI CDO370 EcoRV CDO370 DraI
Linkage Group	[b 2LS]
Insert Enzyme	EcoRI XhoI
Source Species	Avena sativa
Source Germplasm	Brooks (oat)
Source Tissue	etiolated leaf
Insert Size	1
PCR size	1