Query (optional)   in Class  

GrainGenes Marker Report: Xcdo414

[Submit comment/correction]

Locus
Xcdo414
Type
RFLP
Chromosome
7B
Map
Avena-Sorrells-D83.7
[ Show all 6 ]
[ Show Nearby Loci ]
QTL with Locus Marker
BYDV, KxO-17-e
[ Show all 15 ]
Map Data
Diploid Oat, Cornell2
[ Show all 6 ]
Probe
CDO414
Homology
BAA90807.1e-value: 2e-05(AP001168) ESTs AU069906(E11917),D48439(S14636), D46007(S10373),AU030823(E60306) correspond to a region of the predicted gene.; Similar to Arabidopsis thaliana DNA chromosome 4, P1 clone M7J2; putative protein (AL022197) [Oryza sativa]
BAA90807.1e-value: 4e-05(AP001168) ESTs AU069906(E11917),D48439(S14636), D46007(S10373),AU030823(E60306) correspond to a region of the predicted gene.; Similar to Arabidopsis thaliana DNA chromosome 4, P1 clone M7J2; putative protein (AL022197) [Oryza sativa]
BAB02032.1e-value: 6.6(AB020749) cytosolic chaperonin, delta-subunit [Arabidopsis thaliana]
BAA90807.1e-value: 2e-11(AP001168) ESTs AU069906(E11917),D48439(S14636), D46007(S10373),AU030823(E60306) correspond to a region of the predicted gene.; Similar to Arabidopsis thaliana DNA chromosome 4, P1 clone M7J2; putative protein (AL022197) [Oryza sativa]
Image
CDO414 KO autoradiogram
Reference
ReferenceJin H et al. (2000) Combined AFLP and RFLP mapping in two hexaploid oat recombinant inbred populations Genome 94-101.
Possible Orthologs
cdo414
[ Show all 9 ]
Probe for Locus
CDO414
Locus
Xcdo414-7B
[ Show all 12 ]
Synonym
SynonymHAR35_17904
HAR35_23589
Reference
ReferenceHeun M et al. (1991) Construction of a restriction fragment length polymorphism map for barley (Hordeum vulgare) Genome 34:437-447.
General Remarks
Uni-ZAP XR library
Type
cDNA
Sequence
[ Hide all but 1 of 8 ]
BE439068
BE439120
BE439047
BE439091
CDO414_WHE2E0081
CDO414_WHE2E0082
CDO414_WHE2G0011
CDO414_WHE2G0012
Polymorphism
CDO414 EcoRI
CDO414 XbaI
Source Species
Avena sativa
Source Germplasm
Brooks (oat)
Source Tissue
etiolated leaf
PCR size
2