GrainGenes Marker Report: Xcdo484
Locus
Xcdo484
Type
RFLP
Chromosome
5D 7R
Chromosome Arm
5DL 7RS
Map
Avena-Sorrells-E 68.9
[ Show all 6 ]
[ Show Nearby Loci ]
Breakpoint Interval
5DL-5/0 5L-0.85-1.00
Map Data
Diploid Oat, Cornell2 Rye, Ds2 x RxL10 Rye_2009_consensus T. monococcum, DV92 x G3116 Wheat, Physical
Species
Triticum aestivum
Probe
CDO484
Homology
NP_033047.1 e-value: 3.8 retinoic acid induced 1 [Mus musculus] BAA92155.1 e-value: 0.50 (AB007818) glycine-rich protein [Citrus unshiu]
Reference
Boyko EV et al. (1999) A high-density genetic linkage map of Aegilops tauschii, the D-genome progenitor of bread wheat. Theoretical and Applied Genetics 99:16-26.
Possible Orthologs
CDO484
[ Show all 15 ]
Probe for Locus
CDO484
Locus
CDO484
[ Show all 18 ]
Synonym
Synonym HAR35_16073 HAR35_16075
Reference
Heun M et al. (1991) Construction of a restriction fragment length polymorphism map for barley (Hordeum vulgare) Genome 34:437-447.
General Remarks
Uni-ZAP XR library OatUni-ZAPXR [c] OatUni-ZAPXR
Type
cDNA
Sequence
[ Hide all but 1 of 6 ] BE439064 BE439115 CDO484_WHE2G0071 CDO484_WHE2G0072 CDO484-5 CDO484-3
Polymorphism
CDO484 EcoRI CDO484 EcoRV
Linkage Group
2DL, 4AL, 5BL, 2L4L5L[b 7L]
Insert Enzyme
EcoRI XhoI
Source Species
Avena sativa
Source Germplasm
Brooks (oat)
Source Tissue
etiolated leaf
Insert Size
1.6
PCR size
1.6
GrainGenes Marker Report: Xcdo484
|
| ||||||||
|
| ||||||||
|
| ||||||||
|
| ||||||||
|
| ||||||||
| |||||||||
|
| ||||||||
|
| ||||||||
|
| ||||||||
|
| ||||||||
|
| ||||||||
|
| ||||||||
|
| ||||||||
|
| ||||||||
|
| ||||||||
|
| ||||||||
|
| ||||||||
|
| ||||||||
|
| ||||||||
|
| ||||||||
|
| ||||||||
|
| ||||||||
|
| ||||||||
|
| ||||||||
|
| ||||||||
|
| ||||||||
|
| ||||||||
|
|