GrainGenes Marker Report: Xcdo539B
Locus
Xcdo539B
Type
RFLP
Map
Oat-2001-KxO_2 52.5 Oat-2002-KxO-Pal_2 128.69 Oat-KxO-2 54.8 Oat-KxO/AFLP-2 104 Oat-KxO/Q-2 54.8
[ Show Nearby Loci ]
QTL with Locus Marker
Groat percentage, KxO-2
Map Data
Oat, KxO Oat, KxO, AFLP Oat, KxO/QTL Oat-2001-KxO Oat-2002-KxO_Pal
Probe
CDO539
Homology
BAB04949.1 e-value: 1.2 (AP001511) BH1230~unknown conserved protein in B. subtilis [Bacillus halodurans] CAB51836.1 e-value: 0.008 (AJ243961) Putitive Ser/Thr protein kinase [Oryza sativa]
Image
CDO539 KO autoradiogram
Reference
Jin H et al. (2000) Combined AFLP and RFLP mapping in two hexaploid oat recombinant inbred populations Genome 94-101.
Possible Orthologs
[ Hide all but 1 of 8 ] CDO539a cdo539c CDO539X Xcdo539 Xcdo539A CDO539A CDO539C CDO539B
Probe for Locus
CDO539
Locus
CDO539a
[ Show all 9 ]
Reference
Heun M et al. (1991) Construction of a restriction fragment length polymorphism map for barley (Hordeum vulgare) Genome 34:437-447.
General Remarks
Uni-ZAP XR library
Type
cDNA
Sequence
BE439074
[ Show all 6 ]
Polymorphism
CDO539 EcoRI
Source Species
Avena sativa
Source Germplasm
Brooks (oat)
Source Tissue
etiolated leaf
PCR size
1.6
GrainGenes Marker Report: Xcdo539B
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