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GrainGenes Marker Report: Xcdo542

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Locus	Xcdo542
Type	RFLP
Map	[ Hide all but 1 of 6 ] Avena-Sorrells-E 42.4 Oat-2001-KxO_22 53.75 Oat-2002-KxO-Pal_22 97.46 Oat-KxO-22 49.7 Oat-KxO/AFLP-22 66 Oat-KxO/Q-22 49.7
	[ Show Nearby Loci ]
QTL with Locus Marker	Groat percentage, KxO-22 Height, KxO-22-b Height, KxO-22-c Height, KxO-22-g
Map Data	Diploid Oat, Cornell2 [ Show all 6 ]
Probe	CDO542
Homology	AC087181_5 e-value: 3e-24 (AC087181) putative CCAAT displacement protein [Oryza sativa] AC087181_5 e-value: 1e-43 (AC087181) putative CCAAT displacement protein [Oryza sativa]
Image	CDO542 KO autoradiogram
Reference	Jin H et al. (2000) Combined AFLP and RFLP mapping in two hexaploid oat recombinant inbred populations Genome 94-101.
Possible Orthologs	CDO542 CDO542-4H
Probe for Locus	CDO542
Locus	Xcdo542 CDO542 CDO542-4H
Synonym	Synonym HAR35_22993 HAR35_34915
Reference	Heun M et al. (1991) Construction of a restriction fragment length polymorphism map for barley (Hordeum vulgare) Genome 34:437-447.
General Remarks	Uni-ZAP XR library OatUni-ZAPXR [c]
Type	cDNA
Sequence	BE439077 BE439143 CDO542_WHE2H0121 CDO542_WHE2H0122
Polymorphism	CDO542 EcoRI
Linkage Group	4S
Insert Enzyme	EcoRI XhoI
Source Species	Avena sativa
Source Germplasm	Brooks (oat)
Source Tissue	etiolated leaf
Insert Size	1.2
PCR size	1.2