Query (optional)   in Class  All Allele Author Colleague Collection Assembly Gene Gene Class Gene Product Germplasm Image Journal Keyword Library Locus Map Map Data Marker Pathology Polymorphism Probe Protein QTL Rearrangement Reference Sequence Species Trait Trait Study Two Point Data  

---

GrainGenes Marker Report: Xcdo549B

[Submit comment/correction]

Locus	Xcdo549B
Type	RFLP
Chromosome	3D
Map	Oat-1996-KxO_13 44.7 Oat-2000-KxO-Bgl_13 0 Oat-2004-KxO-RGA_KO13 33.06 Oat-KxO-13 46.7 Wheat-Composite2004-3D 39
	[ Show Nearby Loci ]
QTL with Locus Marker	Qbgl.KxO-Bgl_13 QPc-PC54E.KxO-13.3 QPc-PC54Q.KxO-13 QPc-PC59E.KxO-13.2 QPc-PC59Q.KxO-13.2
Map Data	Oat, KxO Oat-1996-KxO Oat-2000-KxO-Bgl Oat-2004-KxO-RGA Wheat, Composite, 2004
Probe	CDO549
Homology	T41528 e-value: 4.1 hypothetical protein SPCC645.11c - fission yeast (Schizosaccharomyces pombe) BAA97251.1 e-value: 6e-21 (AB025633) gb|AAF01580.1~gene_id:MQM1.24~similar to unknown protein [Arabidopsis thaliana]
Image	CDO549 KO autoradiogram
Possible Orthologs	cdo549 [ Show all 10 ]
Probe for Locus	CDO549
Locus	[ Hide all but 1 of 16 ] Xcdo549-3A Xcdo549-3D HD022G16 D1.1_ctg787 D1.1_ctg787_1 D1.1_ctg787_2 D1.1_ctg787_3 cdo549 Xcdo549 Xcdo549A Xcdo549B Xcdo549c cdo549a cdo549b CDO549A CDO549B
Synonym	Synonym HAR35_10419 HAR35_20508 HAR35_27511
Reference	Heun M et al. (1991) Construction of a restriction fragment length polymorphism map for barley (Hordeum vulgare) Genome 34:437-447.
General Remarks	Uni-ZAP XR library
Type	cDNA
Sequence	BE439171 BE439241 CDO549_WHE03A12.r1 CDO549_WHE03A12.s1
Polymorphism	CDO549 EcoRI CDO549 EcoRV CDO549 DraI CDO549 HindIII CDO549 XbaI
Source Species	Avena sativa
Source Germplasm	Brooks (oat)
Source Tissue	etiolated leaf
PCR size	1.2