GrainGenes Marker Report: Xcdo595
Locus
Xcdo595
Type
RFLP
Chromosome
2R 7A 7B
Chromosome Arm
2RL 7HS
Map
[ Show Nearby Loci ]
QTL with Locus Marker
Height, KxO-6-e QHTNV.1997-KxO_6 QHTV.1997-KxO_6.2 QTILL.64Lines_6.3 Yield, KxO-6-b
Map Data
Diploid Oat, Cornell2
[ Show all 14 ]
Probe
CDO595
Homology
AAC24792.1 e-value: 2.7 (AF042016) olfactory receptor [Sus scrofa] H82529 e-value: 2.2 hypothetical protein XF2656 [imported] - Xylella fastidiosa (strain 9a5c)
Image
CDO595 KO autoradiogram
Reference
Jin H et al. (2000) Combined AFLP and RFLP mapping in two hexaploid oat recombinant inbred populations Genome 94-101.
Possible Orthologs
CDO595 Xcdo595-7A Xcnl.CDO595 cdo595
Probe for Locus
CDO595
Locus
CDO595 Xcdo595 Xcdo595-7A Xcnl.CDO595 cdo595
Related Probe
BCD1066
Hybridization_homologue: The two clones were isolated independently but exhibit the same RFLP patterns when hybridized to DNA from test genotypes, and thus are closely related in sequence.
Reference
Heun M et al. (1991) Construction of a restriction fragment length polymorphism map for barley (Hordeum vulgare) Genome 34:437-447.
General Remarks
Uni-ZAP XR library OatUni-ZAPXR [c]
Type
cDNA
Sequence
BE439146
[ Show all 8 ]
Polymorphism
CDO595 EcoRI CDO595 HindIII
Linkage Group
7S [b 1S]
Insert Enzyme
EcoRI XhoI
Source Species
Avena sativa
Source Germplasm
Brooks (oat)
Source Tissue
etiolated leaf
Insert Size
1.5
PCR size
1.5
GrainGenes Marker Report: Xcdo595
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