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GrainGenes Marker Report: Xgwm160-4A

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Locus
Xgwm160-4A
Type
Microsatellite
Chromosome
4A
Chromosome Arm
4AL
Map
[ Hide all but 1 of 8 ]
Chinese_Spring_Deletion_SSR_4A0.9
CS/SQ1-4A45.2
Ta-SSR-2004-4A78.9
Ta-Synthetic/Opata-BARC-4A77.1
Ta-Synthetic/Opata-GPW-4A115.5
Ta-Synthetic/Opata-SSR-4A102.05
Triticum-AxF-4A105.7
Tturgidum-SSR-4A123.8
[ Show Nearby Loci ]
Breakpoint Interval
4AL4-0.80-1.00
Map Data
Durum wheat, Svevo x Ciccio
[ Show all 9 ]
Species
Triticum aestivum
Probe
WMS160
Reference
ReferenceSomers DJ et al. (2004) A high-density wheat microsatellite consensus map for bread wheat (Triticum aestivum L.) Theoretical and Applied Genetics 109:1105-1114.
ReferencePaillard S et al. (2003) An integrative genetic linkage map of winter wheat (Triticum aestivum L.) Theoretical and Applied Genetics 107:1235-1242.
ReferenceRoder MS et al. (1998) A microsatellite map of wheat Genetics 149:2007-2023.
Data Source
Roeder, Marion S.98.09.15
Remark
In Map Ta-Synthetic/Opata-SSR-4A, the intervals most likely to contain locus are Xfba231 - Xcdo545 or distal to Xcdo545
Possible Orthologs
Xgwm160
gwm160
gwm160-4A


Probe for Locus
WMS160
Locus
Xgwm160-4A
Xgwm160
gwm160
gwm160-4A
Reference
ReferenceRoder MS et al. (1998) A microsatellite map of wheat Genetics 149:2007-2023.
General Remarks
Insert contains repeat (GA)21
PRIMER SEQUENCE IS AVAILABLE FOR PUBLIC RESEARCH ONLY. REQUESTS FOR COMMERCIAL USE SHOULD BE DIRECTED TO M. ROEDER.
Type
PCR
SSR
PCR primers
5' TTCAATTCAGTCTTGGCTTGG 3'
5' CTGCAGGAAAAAAAGTACACCC 3'
Amplification Conditions
3 min at 94 deg C; 45 cycles with 1 min at 94 deg C, 1 min at 60 deg C, and 2 min at 72 deg C; and a final extension step of 10 min at 72 deg C
Polymorphism
WMS160
Source Species
Triticum aestivum
Source Germplasm
Chinese Spring