Query (optional)   in Class  All Allele Author Colleague Collection Assembly Gene Gene Class Gene Product Germplasm Image Journal Keyword Library Locus Map Map Data Marker Pathology Polymorphism Probe Protein QTL Rearrangement Reference Sequence Species Trait Trait Study Two Point Data  

---

GrainGenes Marker Report: Xgwm169-6A

[Submit comment/correction]

Locus	Xgwm169-6A
Type	Microsatellite
Chromosome	6A
Chromosome Arm	6AL
Map	[ Hide all but 1 of 9 ] Chinese_Spring_Deletion_SSR_6A 0.95 Kofa/UC1113-6A 92.6 Louise/Penawawa-6A 47.4 Ta-Courtot/CS-GPW-6A 147.4 Ta-SSR-2004-6A 82.6 Ta-Synthetic/Opata-BARC-6A 99 Ta-Synthetic/Opata-GPW-6A 123.3 Ta-Synthetic/Opata-SSR-6A 116.5 Triticum-AxF-6A 156.5
	[ Show Nearby Loci ]
Breakpoint Interval	6AL8-0.90-1.00
Map Data	Durum wheat, Kofa x UC1113 [ Show all 9 ]
Species	Triticum aestivum
Probe	WMS169
Reference	Somers DJ et al. (2004) A high-density wheat microsatellite consensus map for bread wheat (Triticum aestivum L.) Theoretical and Applied Genetics 109:1105-1114. Paillard S et al. (2003) An integrative genetic linkage map of winter wheat (Triticum aestivum L.) Theoretical and Applied Genetics 107:1235-1242. Roder MS et al. (1998) A microsatellite map of wheat Genetics 149:2007-2023.
Data Source	Roeder, Marion S. 98.09.15
Possible Orthologs	Xgwm169 gwm169
Probe for Locus	WMS169
Locus	Xgwm169-6A Xgwm169 gwm169
Reference	Roder MS et al. (1998) A microsatellite map of wheat Genetics 149:2007-2023.
General Remarks	Insert contains repeat (GA)23 PRIMER SEQUENCE IS AVAILABLE FOR PUBLIC RESEARCH ONLY. REQUESTS FOR COMMERCIAL USE SHOULD BE DIRECTED TO M. ROEDER.
Type	PCR SSR
PCR primers	5' ACCACTGCAGAGAACACATACG 3' 5' GTGCTCTGCTCTAAGTGTGGG 3'
Amplification Conditions	3 min at 94 deg C; 45 cycles with 1 min at 94 deg C, 1 min at 60 deg C, and 2 min at 72 deg C; and a final extension step of 10 min at 72 deg C
Polymorphism	WMS169
Source Species	Triticum aestivum
Source Germplasm	Chinese Spring