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GrainGenes Marker Report: Xgwm285-3B

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Locus
Xgwm285-3B
Type
Microsatellite
Chromosome
3B
Chromosome Arm
3BS
Map
[ Hide all but 1 of 11 ]
Chinese_Spring_Deletion_SSR_3B-0.165
Conan/Reeder-3B59.8596
CS/SQ1-3B85.3
Kofa/UC1113-3B107.5
Ta-SSR-2004-3B60.9
Ta-Synthetic/Opata-BARC-3B65.3
Ta-Synthetic/Opata-GPW-3B80.7
Ta-Synthetic/Opata-SSR-3B118
Ta-Synthetic/Opata-update-3B211.2
Triticum-WxM-FHB-QTL-3B65.5
USG3209/Jaypee-3B48.7
[ Show Nearby Loci ]
Breakpoint Interval
C-3BS1-0.33
Map Data
Durum wheat, Kofa x UC1113
[ Show all 11 ]
Probe
WMS285
Reference
ReferenceSomers DJ et al. (2004) A high-density wheat microsatellite consensus map for bread wheat (Triticum aestivum L.) Theoretical and Applied Genetics 109:1105-1114.
ReferenceSomers DJ et al. (2003) Molecular mapping of novel genes controlling Fusarium head blight resistance and deoxynivalenol accumulation in spring wheat Genome 46:555-564.
ReferenceRoder MS et al. (1998) A microsatellite map of wheat Genetics 149:2007-2023.
Data Source
Roeder, Marion S.98.09.15
Remark
In Map Ta-Synthetic/Opata-SSR-3B, the intervals most likely to contain locus are Xcdo328 - Xpsr903 or Xpsr903 - XATPase.2
Possible Orthologs
Xgwm285b
gwm285
Xgwm285
gwm285-3B


Probe for Locus
WMS285
Locus
Xgwm285-3B
[ Show all 6 ]
Reference
ReferenceRoder MS et al. (1998) A microsatellite map of wheat Genetics 149:2007-2023.
General Remarks
Insert contains repeat (GA)27
PRIMER SEQUENCE IS AVAILABLE FOR PUBLIC RESEARCH ONLY. REQUESTS FOR COMMERCIAL USE SHOULD BE DIRECTED TO M. ROEDER.
Type
PCR
SSR
PCR primers
5' ATGACCCTTCTGCCAAACAC 3'
5' ATCGACCGGGATCTAGCC 3'
Amplification Conditions
3 min at 94 deg C; 45 cycles with 1 min at 94 deg C, 1 min at 60 deg C, and 2 min at 72 deg C; and a final extension step of 10 min at 72 deg C
Polymorphism
WMS285
Source Species
Triticum aestivum
Source Germplasm
Chinese Spring