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GrainGenes Marker Report: Xgwm356-2A

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Locus
Xgwm356-2A
Type
Microsatellite
Chromosome
2A
Map
Chinese_Spring_Deletion_SSR_2A0.425
[ Show all 7 ]
[ Show Nearby Loci ]
Breakpoint Interval
C-2AL1-0.85
Map Data
Wheat, Chinese Spring x SQ1
[ Show all 7 ]
Probe
WMS356
Reference
ReferenceSomers DJ et al. (2004) A high-density wheat microsatellite consensus map for bread wheat (Triticum aestivum L.) Theoretical and Applied Genetics 109:1105-1114.
ReferenceRoder MS et al. (1998) A microsatellite map of wheat Genetics 149:2007-2023.
Data Source
Roeder, Marion S.98.09.15
Remark
In Map Ta-Synthetic/Opata-SSR-2A, the interval most likely to contain locus is between Xpsr934 and Xcdo678
Possible Orthologs
[ Hide all but 1 of 6 ]
Xgwm356
Xgwm356-6A
Xgwm356-7A
gwm356
gwm356-6A
gwm356-2A



Probe for Locus
WMS356
Locus
Xgwm356-2A
[ Show all 8 ]
Reference
ReferenceRoder MS et al. (1998) A microsatellite map of wheat Genetics 149:2007-2023.
General Remarks
Insert contains repeat (GA)36
PRIMER SEQUENCE IS AVAILABLE FOR PUBLIC RESEARCH ONLY. REQUESTS FOR COMMERCIAL USE SHOULD BE DIRECTED TO M. ROEDER.
Type
PCR
SSR
PCR primers
5' AGCGTTCTTGGGAATTAGAGA 3'
5' CCAATCAGCCTGCAACAAC 3'
Amplification Conditions
3 min at 94 deg C; 45 cycles with 1 min at 94 deg C, 1 min at 55 deg C, and 2 min at 72 deg C; and a final extension step of 10 min at 72 deg C
Polymorphism
WMS356
Source Species
Triticum aestivum
Source Germplasm
Chinese Spring